Rhizophagus irregularis: OCT59_022453
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Entry
OCT59_022453 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K02328
DNA polymerase delta subunit 2
Organism
rie Rhizophagus irregularis
Pathway
rie03030
DNA replication
rie03410
Base excision repair
rie03420
Nucleotide excision repair
rie03430
Mismatch repair
rie03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OCT59_022453
03410 Base excision repair
OCT59_022453
03420 Nucleotide excision repair
OCT59_022453
03430 Mismatch repair
OCT59_022453
03440 Homologous recombination
OCT59_022453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rie03032
]
OCT59_022453
03400 DNA repair and recombination proteins [BR:
rie03400
]
OCT59_022453
DNA replication proteins [BR:
rie03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
OCT59_022453
DNA repair and recombination proteins [BR:
rie03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
OCT59_022453
MMR (mismatch excision repair)
DNA polymerase delta complex
OCT59_022453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
36869548
NCBI-ProteinID:
XP_025174310
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All DBs
Position
31:1592610..1594772
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AA seq
480 aa
AA seq
DB search
MDEESEASTFPVEDSTSDIPVDYLLSLSRTAKEAVEISRAEVTYDDMPEYRDKLLNKKNS
YTHFAHIYFERYTKLSKIIRNKWKDCEAKHVNKILNVKPNELCYLVGTVYMEMQNKPNIL
AELSRNNWEPAPILKEKYCSPTDEFWLDDDSGRIKIVGDRLKEEIIVSGIIMSVLGKENS
QGEFEVSDICIAGLPKQPEQPEQIYPRIQMNIDRDDDKYVALISGLNIDTSGISETRLQI
MMEYFTGELGCFHEQKNISSKIARIIIAGNSLATAKPVPDERKQKKYGYDNSLYDAEPLN
NLDNFLEKLCSLLPVHIMPGQNDPADSTLPQQPILSNLLPKVGTNPNFHSVTNPYWCKFD
DVTFLGTSGQTIDDIYKYIEIEDRLIIAERTLHWRHMAPTAPDTLWCYPFKDVDPFIIDQ
MPHVYFIGNQKEFATKLVKGIDQQCTRIILLPSFAESGIVVFLNLNNLKCHTIYFPSTFF
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaaagcgaagcctccacgtttccggttgaagattcaacatctgacattcct
gtcgattacctattatcattatcaagaactgctaaggaagcagttgaaataagtcgcgca
gaagtaacttatgatgatatgccagaatatcgtgataaattactaaataaaaagaactca
tatacacattttgctcacatttattttgaaagatatactaaattaagtaaaattatcaga
aataaatggaaggattgtgaagcaaaacacgttaataaaatattgaatgtcaaacctaat
gaattgtgctatcttgttggaactgtttatatggaaatgcaaaataagcccaacattctt
gctgagctatctagaaataattgggagcccgccccaattttaaaagaaaaatattgtagt
cctacagatgaattttggttagatgatgattctggtagaataaagattgtaggtgataga
ttgaaggaagaaataattgtttcaggaattattatgtcagttttaggaaaagaaaattct
caaggagaattcgaagtatcagatatttgtattgccggacttcccaaacaacctgaacaa
cctgaacagatttatccaaggatacagatgaatatagatagagatgatgataagtatgtg
gcattgataagtggactgaacattgatacgagtggtatttcggaaacgcgattacaaata
atgatggaatactttactggtgaactgggttgttttcatgaacaaaaaaatatatcttca
aaaattgcacggataataattgctggtaatagcctggctaccgctaaaccagttcctgat
gaaaggaagcagaaaaaatatgggtacgataattcattatacgacgcggaaccgctcaat
aatttagacaatttcctagaaaaattatgttcattattgcccgttcatattatgccggga
caaaatgatccagctgattcaacattacctcaacaaccgattctttctaatttacttcct
aaagttggaacaaatccaaattttcattccgttactaatccttattggtgtaaatttgat
gatgtcacgtttcttggtacatctggtcaaactattgatgatatatacaagtatatagaa
attgaggatagacttattattgcggagcgtacattacactggaggcatatggcacccacc
gctcccgacacactctggtgttatccatttaaagatgttgatccttttataatcgaccaa
atgcctcatgtatattttattggtaaccaaaaagaatttgccacaaaattagtaaaagga
attgaccaacaatgtacgcgaattattttattaccatcatttgcagaaagtggaatcgta
gtttttctaaacttgaataatctaaaatgtcatactatatattttccttcaacattcttt
taa
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