Rhizophagus irregularis: OCT59_022471
Help
Entry
OCT59_022471 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K07374
tubulin alpha
Organism
rie Rhizophagus irregularis
Pathway
rie04145
Phagosome
rie04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
OCT59_022471
09142 Cell motility
04814 Motor proteins
OCT59_022471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rie03019
]
OCT59_022471
03036 Chromosome and associated proteins [BR:
rie03036
]
OCT59_022471
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rie04812
]
OCT59_022471
04147 Exosome [BR:
rie04147
]
OCT59_022471
Messenger RNA biogenesis [BR:
rie03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
OCT59_022471
Chromosome and associated proteins [BR:
rie03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
OCT59_022471
Cytoskeleton proteins [BR:
rie04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
OCT59_022471
Exosome [BR:
rie04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
OCT59_022471
Exosomal proteins of other body fluids (saliva and urine)
OCT59_022471
Exosomal proteins of colorectal cancer cells
OCT59_022471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
36869562
NCBI-ProteinID:
XP_025174327
LinkDB
All DBs
Position
31:complement(1645875..1648358)
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSVGICDDSFNTFFSETGAGK
HVPRTVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADNCTGLQGFLVFHSFGGGTGSGFGALLLERLSVDYGKKSKLEFSVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIAQVVSSITA
SLRFDGSLNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLTVAEITYSCFEPNN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGTDSLEGEEEEAEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatttctatccacgttggtcaagccggtgtccaaatcggtaacgcctgc
tgggaactttattgccttgagcacggtattcaacccgatggtcaaatgccatcagacaaa
tccgtcggtatttgcgacgattcttttaatacttttttttctgaaaccggagctggcaaa
cacgttccccgcaccgtttttgttgatttggaacctaccgtcgtcgatgaagtccgtact
ggtacttaccgccagttatttcaccctgagcaattgatcaccggaaaggaagatgctgca
aataattatgctcgtggtcactatactattggaaaagaaatcgtcgacctcgtccttgat
cgtattcgcaagcttgctgataactgcactggtctccaaggatttttagtttttcattcc
ttcggtggtggtaccggatctggttttggtgctttacttttagaacgtctctctgttgat
tacggaaagaaatccaaattggaattctccgtctatcccgcaccacaggtctctactgcc
gtcgttgaaccttataattctatcttaacaactcatactactttggaacattcagactgt
gcttttatggtcgataatgaggctatttatgatatctgcaggagaaatcttgacattgaa
cgaccaacctacactaatttgaacagattaattgctcaagtggtttcttctattacggct
tcacttcgtttcgatggatcactcaacgttgacttgactgaattccaaacaaatttggtc
ccatatcctcgtatccatttcccattggtcacatacgctccagttatttccgccgaaaag
gcttatcacgaacaacttactgtggccgaaattacctactcctgcttcgaaccaaataat
caaatggtcaaatgtgatccacgccacggcaaatatatggcttgttgtttgttataccgt
ggcgatgtcgttccaaaagacgtcaacgccgccattgccaccatcaagaccaaacggacc
attcaatttgtagactggtgtccaaccggttttaaagttggtattaactatcaaccccca
accgttgtccctggtggtgatcttgccaaagttcaacgtgctgtttgcatgttatcaaat
acaactgctatcgctgaagcgtgggcacgcttagaccacaaatttgacttgatgtacgcc
aaacgtgctttcgtccattggtatgtcggtgaaggtatggaagaaggtgaattctctgaa
gcacgtgaagatttggccgcgttggagaaggattacgaggaagtgggaactgattcactt
gaaggagaagaagaggaagctgaagaatattaa
DBGET
integrated database retrieval system