Rhizophagus irregularis: OCT59_022761
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Entry
OCT59_022761 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
rie Rhizophagus irregularis
Pathway
rie03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OCT59_022761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rie03019
]
OCT59_022761
Messenger RNA biogenesis [BR:
rie03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
OCT59_022761
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
PIN_4
Rrp44_S1
CSD2
OB_HELZ2
Thymidylate_kin
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
36865909
NCBI-ProteinID:
XP_025182483
LinkDB
All DBs
Position
31:complement(2886678..2891119)
Genome browser
AA seq
1002 aa
AA seq
DB search
MLHNKSYLKRGRGGKVFKAVKEHYLRDDIWCSVECCTICSHTEPILSSIPAKTKLVTKPH
YIIPDTNVFMNQIDIIEHPALQNVIILQTVYEELRHLSLSVYNRLKKMINDPNRKFYVFA
NEHHRDTFIERIKEESPNDRNDRAIRAAVKWYATHVKQIADKGKSLEIVLLTDDAENIQR
AKQDGLLAYSVREYVEGMIDTPELVDMLGNVRISDNKDKKIVYEEHLSASQITNGIKNQT
LYQGTLNISMHNYLEGSIQNGDIQITILGRKNLNRAIQGDIVAVQLFPKSEWLRAPTAVI
VEEEEEKNLAEELQENCKPKEQSEEADSDLFEAPQPTGKVVGIIKKNWRPYCGFINKQSV
KGSSTSTLSENVSVYPIDRRIPRINIRTRQAQNLMGQRILVAIDSWHKDSIFPMGHFVKA
LGAAGDKLTETEVLLLEHDVPHQEFAQQVLNCLPVEGDLWVVKDEHLQRRADLRHLNVCS
IDPPGCTDIDDALHVRQLPNNNYEVGVHIADVTHFVKPNTPLDEEAALRGTTVYLINKRI
DMLPGLLGTNLCSLKSKVDRLAFSCIWELSPEAEIVNVTFTKSIISSKESFTYEEAQARI
DDQRLQDDLTKGLRVLNDLAKKLRARRMERGALTLASPEVRYKLDFDSQDPIDVEMKELR
ETNALVEEFMLLANISVAEKIYKKFAASSLLRRHPPPTAFKLDNLNKAISAFGLTLHYET
SKALADSLDEAVLPEDPYFNKLLRILTTRCMMQATYFCSGTFSVHEYRHYGLASEIYTHF
TSPIRRYSDVIVHRMLAASIYDDEVYGSELIDKKKIEQLCDVLNHRHRMAQMAARSSVEL
HTNLFFKGKTEQVEGYVTRVLKNGFVVLVQKYGIEGIVYSSDNSKTKLNTTASNSTSLII
YNSHDNSLDSITGDGKKISIKLFDKVIVQVSVDEDLVGGGAGGMRQKLKLELVKPVVPGL
SVSNDTSTDNNEIIEENNYNNKKDKRENTNGGRKKKMKIENM
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgcttcataataaatcatacctcaaacgcggtcgaggtggtaaagtttttaaagctgta
aaagaacactatcttcgagacgatatttggtgttcagttgaatgctgcacaatatgctct
cacactgaaccaatattaagttctattccagctaaaacaaaacttgtaacaaaacctcat
tacattatacctgacacgaatgtttttatgaatcaaattgatataattgagcatccagct
ttacaaaatgttattattttgcaaactgtttatgaagaattacgacatttaagcttatct
gtatataatagactgaaaaaaatgataaatgacccaaaccgaaaattttacgtgttcgcc
aatgaacatcatcgggatacattcattgaacgtataaaagaagagtccccaaacgataga
aacgatcgagctataagggcagctgttaaatggtatgcaactcatgttaagcaaattgct
gataaaggaaaatctcttgagattgttcttttaacagatgatgcagaaaatatacaaaga
gctaagcaggatggattattagcttactcagttagagaatatgttgaaggaatgattgat
actccagaattggttgacatgctcggaaatgttcgtatttctgataataaggacaaaaaa
atcgtctatgaggagcatctttccgcttcacaaataacaaatggaattaagaatcaaact
ttatatcaaggaactttgaatataagcatgcacaattatcttgagggatctattcaaaat
ggtgatattcaaataacgatacttggaagaaaaaatttaaatagagccatccaaggagat
attgttgctgttcaactatttccgaaatctgaatggcttagggctccaacagcagtaatt
gtagaagaagaggaagaaaagaatttagccgaagaattgcaagagaattgcaaacctaaa
gaacaatctgaagaagcagatagtgatctattcgaagcaccacagcctactggaaaagta
gttgggattattaaaaaaaattggagaccatattgtggattcattaacaaacaatctgtt
aaaggttccagtacatcgactttgtctgaaaatgtgtcggtttatcctatagatagacga
ataccaagaataaatataagaactaggcaggctcaaaaccttatgggacaaagaatattg
gttgccatcgattcatggcataaggattctatatttccaatgggtcattttgttaaagct
cttggcgctgcgggtgataaattaactgaaacagaagttttacttttggagcatgatgtg
ccacatcaagaatttgcacaacaagtcctgaattgtttacccgttgaaggtgatttatgg
gtagttaaggatgaacatttacaaagacgagccgatttaagacatttgaatgtctgtagc
attgatcctcccggatgtacggatattgatgacgctttacatgtgagacaattgccaaac
aacaattatgaagttggagttcatattgcggatgtcacacattttgttaaaccaaatact
ccactagacgaagaagccgctttacgtggaacaacagtttatttgattaacaagcgtatt
gatatgttgccaggattattaggaacaaatttatgctcccttaaaagtaaagttgacaga
ctcgcattttcatgtatttgggaattgagccctgaagcagaaattgttaatgttactttt
actaagagtattatttcatcaaaggaatctttcacatatgaagaagctcaagctcgtatt
gatgaccaacgcttacaggatgatttaacaaaaggtcttagagttttaaatgatttagct
aaaaaacttcgtgcaagacgtatggaacgtggtgcattgacacttgcaagtcctgaagtt
cgatataagttagattttgattcacaagatcctattgatgtagaaatgaaggaattgaga
gaaaccaatgcacttgttgaggaatttatgttgttggctaatatatcagtagctgaaaag
atatataaaaagtttgccgcctcatcactattaagacggcatcctcctccgactgcattt
aagcttgataatttaaacaaagctatttctgcttttggtttaacgttacattatgaaaca
tcgaaggctctggcagactcactagatgaagcagtgttacccgaagatccatatttcaac
aaattattaagaatattaacaacaagatgtatgatgcaagccacctatttttgttctggc
acattttcagtgcatgaatatagacattatggacttgcttcagagatttatacacacttt
acgtcgccaattcgaagatattccgacgtaattgtacatagaatgttagctgcatctata
tatgatgatgaagtatatggtagtgaacttattgataaaaaaaaaatagaacaactttgt
gatgtattaaatcataggcatagaatggcacaaatggcagctcggagctctgtagaattg
catacaaatcttttctttaaaggaaagaccgaacaagtcgaaggatacgtcactcgtgta
ctaaagaatggattcgttgtcttagtacaaaaatatggtatcgaaggaattgtatattca
tcagacaattcaaaaacaaaactaaacacaacagcgtcaaattcaacatccctaattatt
tacaattcacatgataatagtttagatagtattacaggagatggtaagaaaataagtatc
aagttatttgataaagttatagttcaagtaagcgtagacgaagatttagttggaggtggc
gcaggaggcatgagacaaaaattaaaactggaattagtcaaaccagttgtacctggatta
agtgtatccaatgatacaagtactgataataatgaaataattgaagagaataactataat
aataaaaaagataagagagaaaatactaatggaggaagaaaaaagaagatgaaaattgag
aatatgtga
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