Rhizophagus irregularis: OCT59_022920
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Entry
OCT59_022920 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K14617
LMBR1 domain-containing protein 1
Organism
rie Rhizophagus irregularis
Pathway
rie04977
Vitamin digestion and absorption
rie04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
OCT59_022920
04980 Cobalamin transport and metabolism
OCT59_022920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rie04131
]
OCT59_022920
Membrane trafficking [BR:
rie04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
OCT59_022920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
Motif
Other DBs
NCBI-GeneID:
36873943
NCBI-ProteinID:
XP_025168396
LinkDB
All DBs
Position
32:540040..543251
Genome browser
AA seq
546 aa
AA seq
DB search
MAVLVFGAWAIYIIICAVLFVFSIIFTNYYQDKHDSERLATVVAICSLALCLSTVALFPV
DIFLVSSTVDLHTGLKHEWATKEVVEGIVHNLKFVYYGSYGLIAIFCAFIIPFAYFYFEE
LEEEQTNSQRVMAALKYTGFFVAFVLICLLFGFVLRPTEKAPIDLDFFKKLLSSSLGENS
ISFVISILMVLGMVVFICYTAPGLSLLPIGMIKGTSKINSVSNSELSSLLKVNREKQRII
NAKYSDPTKTMSRKDAKQFEILRNEEKVLLRQLRIATESRSQFWNKIMFILRPFELIIGF
MLTILTAVIFMSIFLTCIDKVKNSICGKECGYIINHPDIFNPLNFIFLKASKYFPIDYFF
MVLLILYFFISTVYGVISLGIRFFWVHLYRFRKSSTPPQGLLFGAILFMLSLLALNYTLT
MVVVPQYAQFGSQKYCNHTINGDRNCTEYSQLIVPCDVTAPTDICTPTVISTFIHRITLN
APFFGVIFYYAHWGFLGVALLGFMYAMIRSPNNALYDDLDDDIGEEEQGLLANIGRRNRG
AIGIDD
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagtattagtttttggtgcctgggcaatatatataattatctgcgccgttttattc
gtatttagtattatattcacaaattactatcaagataaacatgacagtgaacggttagct
acagtggtagcaatttgttccttagcactatgtttaagtacagttgctttattccccgta
gacatatttttggtttcaagtacagttgatttacatacaggacttaaacacgaatgggct
actaaagaagttgtagaaggaattgtccataaccttaaatttgtatattatggatcatat
ggattgatcgcaatattttgtgcatttattattccatttgcatatttttattttgaagaa
cttgaggaggaacaaacaaattcgcagcgtgttatggccgccttaaaatacactggattc
tttgtggcatttgttcttatatgtttattatttggatttgttttgcgaccaacggagaaa
gcgccaatcgatttggattttttcaaaaaacttttatcttcgagtctcggagagaatagt
atctcatttgttatatctattcttatggttcttggaatggtcgtgtttatttgctatacc
gcaccaggactttcccttcttccgatcggaatgattaaaggcacaagtaaaattaactct
gtatctaattcggagttgagttctttactcaaagtcaatcgtgaaaaacaaagaataatc
aatgcaaaatattctgacccaactaagacaatgtctagaaaagacgcaaagcaatttgaa
attttgagaaatgaagaaaaagtgttgcttcgtcagttaagaatagctacagagtcaaga
agccaattttggaataagattatgttcattcttaggccatttgagttaataatcggtttt
atgttaactatattgacagctgtaatatttatgtcaatattcttaacctgtatcgataaa
gtcaaaaattcgatttgcgggaaggaatgtggatacataattaatcatccagatattttt
aatcctcttaattttatattccttaaagcttctaaatatttcccgatcgattatttcttc
atggtactccttattctgtattttttcattagtacagtatatggagttatttcacttgga
attcgcttcttttgggtacatctttatagattccgaaaaagttctacgccgcctcaagga
ttgttatttggcgctatattgtttatgctaagtttgttggctcttaattatactttgaca
atggtggttgttcctcaatatgctcaatttggaagtcaaaaatactgtaatcatacaata
aatggggatcgcaattgtactgaatattcacagttaattgtaccatgcgacgttactgca
ccaacagatatttgtaccccgacagtaatatctacgtttattcatcgtataacacttaat
gcaccattttttggagtaatattttattatgcacattggggatttttaggagttgcacta
ctcggatttatgtatgctatgattagatcacctaataatgcattatatgatgacttggat
gatgatattggcgaagaggaacaaggtttattagctaatattggaagaagaaatagaggt
gctattggaattgatgattaa
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