Rhizophagus irregularis: OCT59_022980
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Entry
OCT59_022980 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K10609
cullin 4
Organism
rie Rhizophagus irregularis
Pathway
rie03420
Nucleotide excision repair
rie04120
Ubiquitin mediated proteolysis
Brite
Ubiquitin system [BR:
rie04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
OCT59_022980
DNA repair and recombination proteins [BR:
rie03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
OCT59_022980
TCR (transcription coupled repair) factors
Cul4-CSA complex
OCT59_022980
Exosome [BR:
rie04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
OCT59_022980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
36868537
NCBI-ProteinID:
XP_025176574
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Position
32:793980..797835
Genome browser
AA seq
843 aa
AA seq
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MSSRSRQNTINRINTNANNNNNNNEEERGGAIKRTRLDNANYTSTHTFSSSSSSSTAVAA
ATASSSSSYDNFIGKTSKKYDLVNHGKDLIFPSHKPIPDRPNDAVRQGPQKQPIKKLVIK
GLKDKPKLPDNYEEVTWSKLQAAVQAIFNYQRIGTSLEELYKACENLCLHKMAPSLYKRL
AGEIEEHLKVEKTKLENNLNENDTLLIVVNKCWQAHCEQMGLIRSIFLYLDRTYVLQTSG
VISIWDKGLEIFQKQIMSSSAGDIKKKTMNGLITLIRLERNGDSVDRRLLHSLIHMFIDL
GIYCPSFENLFLMETRSYYHHEGISLVSEITVPRYLKHVKKRLREESDRVSNYLDWKTKN
PLTKVVDDELIKRHVDTLLEKGFNDMMEDQHADEHIQELGRLYDLLARVNSLDRLRLYFG
NYIKKTGSNIVNNVNQESTMVEDLLALKKKMDSIVAISFDRNYNFAHAVKESFEVFINQR
QNKPAELIAKYVDLKLKLGNKRMDDLEIEKTLDEVLVLFRYIQGKDIFEAFYKRDLAKRL
LLNKSASFDYERSMLSKLRKECGPGFTSKLEGMFKDIDLSRDFMNSFYHSRISENLRTNI
KIDLYVNVLTQGFWPTYSPAPLILPPVMAECQEIFKEFYLSKHGGRNLKWQNSLGHCLLA
AEFPKGNKELVVSLFQAVVLLQFNDLKLKERISYEHIKEHTGIEKKELDRTLQSLACGKV
RVLKKHPKGRDVSPTDSFSVDEMFDVKFFRIKVNAIQMKETLEENQETNERVFLDRQYQV
DAALVRIMKMRKKLSHNELVSELLSQLKFKAQVSDIKKRIESLIEREYLERDSEDPSILK
YLA
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacgttctcgtcaaaatactatcaatcgtatcaataccaacgctaataataac
aataataataatgaagaagaacgtggtggagctataaagcgtactcgtttagataatgct
aattacacttcaacgcacactttttcgagttcatcgtcatcatctactgctgtcgccgct
gctaccgcatctagcagttcctcatatgataattttataggaaaaacatcgaaaaaatat
gatcttgtcaatcatggtaaagatttgatttttccttcacataagccgatcccagatagg
ccaaatgatgctgtacggcaaggtcctcaaaaacaaccaattaagaaattagttattaag
ggtctaaaagataaaccaaagttaccggataattatgaagaagtaacatggtcaaagctt
caggcagcggttcaagctatctttaattatcaacgcattggcactagtcttgaagaactt
tataaagcttgtgaaaatctttgtttacataaaatggctccatcactttataaaagatta
gcaggggaaatcgaagaacatttgaaagtggagaagactaagcttgaaaataatttaaac
gaaaacgatacacttcttatagttgtaaataaatgttggcaggcacattgtgaacaaatg
ggtttaatccgaagtatatttttgtatcttgatcgaacttatgtacttcaaacttctgga
gttatttcaatatgggataaaggacttgaaattttccaaaaacaaattatgtcttcatcg
gcaggtgatataaaaaagaagacaatgaacggtttaatcacgctcatcagactcgaaaga
aacggtgattccgttgaccgtcgtcttctgcattcccttattcatatgtttattgatctt
ggaatatattgccctagttttgaaaatctattcttgatggaaacccgtagttattatcat
catgaaggaataagccttgtaagcgaaatcacagtgccgagatatctaaaacatgtaaag
aaacgtttaagggaagaaagtgacagagtttcgaattatttggattggaaaacgaaaaat
ccactgacaaaagtagtagatgatgaattaataaagagacatgttgatacacttttggag
aaaggcttcaatgatatgatggaggaccaacatgcagatgagcatatacaagaattagga
agattatatgatcttttggctcgagtcaactctcttgatcgtctgcgtctttacttcgga
aattatattaagaaaaccggttcaaatatagttaacaacgtaaatcaagaatcaactatg
gttgaagatttgcttgccctgaaaaagaaaatggatagtattgttgctatatcatttgac
cgaaattataattttgcacacgccgtaaaagagagttttgaggtgttcattaatcaacgt
caaaataaacctgccgaacttattgccaagtatgtcgatttgaaactgaaacttggtaat
aaacgtatggatgatttagaaatcgaaaagacgttggatgaagtattggttttattcaga
tatattcaagggaaagatatatttgaggccttttataagcgtgaccttgcaaaacgtctt
ttgcttaacaagagtgcatcatttgattatgagaggagcatgttatccaaattgagaaaa
gaatgtggaccggggttcacaagcaaactggaaggcatgtttaaggatattgacctttct
agagattttatgaattcattttatcattctagaatttctgagaatttaagaacaaacatt
aaaattgatctttatgtaaatgtgctaacccaaggattttggcccacatattcaccagca
ccacttatcttgccacctgttatggcagaatgtcaagaaatatttaaggaattttatctc
agcaaacatggaggacgaaatttaaagtggcaaaattctttaggtcattgcctattggca
gcagagtttccgaaaggaaacaaagaattagtcgtgagtttattccaagcagtagtgtta
ttacaatttaatgacttgaagctaaaagaaagaatttcatacgaacacattaaagaacat
acaggaattgagaaaaaagaacttgatcgtacgttacaatcattagcatgtggtaaagtt
cgcgttcttaaaaaacatccaaagggacgtgatgtgagtcccactgattcttttagtgta
gacgaaatgtttgatgtcaaatttttccgcattaaagttaatgctattcaaatgaaagaa
acgttggaagaaaatcaggaaactaatgagcgtgtcttcctggatcgacaatatcaagtg
gatgccgcgttagtccgaataatgaaaatgcgaaagaaacttagtcataatgaactagtt
tctgaattattgtcacagttaaaattcaaagcacaggtatcagatattaagaaacgtata
gaatctttgatagagcgtgaatacttagaaagagatagtgaagatccatcaatacttaaa
tatttggcttaa
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