Rhizophagus irregularis: OCT59_023020
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Entry
OCT59_023020 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K14830
protein MAK11
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rie03009
]
OCT59_023020
Ribosome biogenesis [BR:
rie03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
OCT59_023020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
WDR55
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_DCAF12
Beta-prop_Vps41
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_WDR19_2nd
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_NWD2_C
Beta-prop_WDR75_2nd
Beta-prop_IP5PC_F
WD40_like
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
36870409
NCBI-ProteinID:
XP_066006531
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Position
32:complement(1005117..1006860)
Genome browser
AA seq
412 aa
AA seq
DB search
MPKSKKTRLSNSITKQENKLKKKEKIDQKAISNQPTTKSDFKLNNKLQIKEQTNELISLD
TEDKIIVKDFLIIAGSYERILYGIDAHWIKSGESSDDDDFSLKLDPIFVFSAHTGCIKTV
SVGGKFLASGSTDEVIKLYNLRKRKELGSLLQHEGSITTIQFFNKTHMFSGSEDGTICIW
RTKDWECLKTLKGHKGRVNSLAVHPSGKIALSVSNDKTVRLWNLLAGQKASVNKLGREGE
IILWNSSGEQYAILMAREIEIYSTSDAQILQRFQSGNSRFLCMQYYEHEHLGDLLIVGSE
DKAIRVYEVKSGNCLITLLGHKNRIKDISIIQSIPPNNSAPFTLLSSISSDGVINVWNLN
KVLPHNYKEGNNPIFNLPLATYDTKSRLTCVVLSQKFDAQDLEERASQQDFA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagtcgaagaaaacgcgcctctcgaattctataacaaaacaagaaaataaatta
aagaaaaaagaaaaaattgatcaaaaagctatttcaaaccaacctacgaccaagtctgat
tttaaacttaataacaaattacaaattaaggaacaaacaaatgaacttatttcgttagac
acagaggacaaaatcattgttaaagattttttaattattgcaggaagctatgaaaggatt
ttatatggaattgatgctcattggataaagtccggcgaaagctctgatgatgatgatttt
tcattaaaattagatccgatctttgtcttttcagctcatactggatgtatcaaaacagta
tcggtgggaggcaaatttttagcttcaggaagtactgacgaggttataaagttatacaat
ttgagaaaacgtaaggaacttggatccttgttacaacatgaaggttctataacaactatt
caattctttaataaaactcatatgtttagcggaagcgaagatggtacaatatgtatttgg
agaaccaaagattgggaatgtttaaaaactttaaaaggtcacaagggacgtgtaaattct
ttagcggttcatccatctggcaaaatagctttatcggtatctaatgataaaactgttcgc
ttatggaatttattggctggccaaaaggccagcgtaaacaaacttggaagagagggtgaa
atcatcttatggaattcatcaggtgaacaatatgcaattttaatggctcgagaaatagaa
atatacagcacttcagatgctcaaatattgcagagatttcaaagtggcaattctcgtttt
ctttgtatgcaatattatgaacatgagcatctgggtgacttgctgattgtaggaagcgaa
gataaggccataagggtatatgaagttaagagcggtaattgtttgataacgttattggga
cataaaaataggatcaaggacatatcaattattcaatcaataccgccaaataatagtgcg
ccttttacattattatcatccatctcttctgatggtgtcattaacgtatggaaccttaat
aaagtgttaccacacaattacaaagaagggaataatccgattttcaatttaccgttggca
acatatgatacaaaaagtaggttaacttgtgttgtattatctcaaaaatttgatgctcaa
gatctagaagaaagagctagtcagcaagattttgcataa
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