Rhizophagus irregularis: OCT59_023136
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Entry
OCT59_023136 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K10865
double-strand break repair protein MRE11
Organism
rie Rhizophagus irregularis
Pathway
rie03440
Homologous recombination
rie03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OCT59_023136
03450 Non-homologous end-joining
OCT59_023136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rie03032
]
OCT59_023136
03400 DNA repair and recombination proteins [BR:
rie03400
]
OCT59_023136
DNA replication proteins [BR:
rie03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
OCT59_023136
DNA repair and recombination proteins [BR:
rie03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
OCT59_023136
BRCA1-C complex
OCT59_023136
NHEJ (non-homologous end-joining)
MRX complex
OCT59_023136
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
EBNA2_Core
DUF5320
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
36881556
NCBI-ProteinID:
XP_025164768
LinkDB
All DBs
Position
32:complement(1559148..1562311)
Genome browser
AA seq
869 aa
AA seq
DB search
MDPSKDSLSIMIATDIHLGYQEQDPTRGTDSFNTFREILRHAKNHKVDMVLLGGDLFHEN
KPSLYTLNEAIKLLHEFTVGDKKINFKISSDQYKNFGRRVNYSNPNSNTALPVFSIHGNH
DDPTGAKRVGPLDILSSSDLINYFGKINKVDDIEVYPITIEKGSTKLNIFGIGNVRDERL
HRAFNNNQVTWCKPDNIDDYVNLMVIHQNRVPHSPKNYIPENMLPEFLDIVFWGHEHDCR
ILPETNSQRNFDVIQPGSPVATSLCDGEAITKYVGILEIYDKPRKGKKYEIKPILLSTVR
PMVIDSIDIKRETDISPGDDKALETYLRSKVNEMIVRAQELWNENNPDGENPPLPLIRLN
VEMSREYNRIRTSLFEQEFKNRIANSDSNGQKIVTYHYKEAERSQNQRFVAPLDFGDEEI
SQKNATYFVIGQLAKTLKEKPSHFFPENGILNSIDLYVNKNDENAVRDFFESTREHMKNH
LINHGIPEHSLPGESEIKNVITLEKDRLNQEWSTQFDPEHYLEKSRTEQSITSVAAVSTT
SHGRGRGRGRGRGRGRGRGRGSRSTAVEELDEDEDMDLDSGTRVNSQNKFSTSRGSQQVT
IDEQDEYVEDVHFDLPKSSVTTRSRNSRARDRMIVIDEEQEFNDEFDNELEAPAPSTKNR
TTRTRDQGRGRGRVAAIIDLEQDDNELPARTSSVKSSGPGRRRGQVAAVNDGDHESEDNN
GSTTRISAKSSTRDQGRACDEEKDFEDEDYVPTSKTTRGRGRGRGRGRGRGRGSQTQDRE
EQMEIDNEFTGDNPRAVTPETYNQIKSVSKASAGVKRRINSIFDSPSKRIMTDTTKLSIL
EQRSSPSVTSQQSQRTQTFHELDDDDLFD
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggatccttcaaaagattcactatcaataatgatcgcgactgatatacacctggggtat
caggagcaagatccaacacgcggaaccgatagcttcaacactttcagagaaatactgcga
catgcaaagaaccataaagtggatatggtattattaggtggtgatctatttcatgaaaat
aaaccgtcactttatactttaaatgaagcaattaaattgcttcacgagtttacggttggt
gacaaaaaaattaatttcaaaatctccagtgatcaatataaaaattttggaagacgggtt
aattattctaatcctaatagcaataccgctttacccgtgttttctatacatggtaatcac
gatgatccaactggagctaaacgtgttggtccattagatatactctcatcatcagacttg
attaattattttggcaaaatcaataaggtggatgacattgaggtttacccaataactatt
gaaaagggatcaacgaaactaaatatattcggaattggtaatgtaagagatgaaaggtta
catcgagcctttaataataatcaggtaacatggtgtaaacctgataacatcgacgattat
gtcaatttaatggtaattcatcaaaatcgagtacctcatagtcctaaaaattatatacca
gaaaatatgcttccagaatttctggatattgttttctggggacacgaacatgattgcaga
atacttcctgaaaccaattcacaaagaaattttgatgttattcagccaggttctccagtg
gctacaagtttatgtgacggagaagctatcacaaaatatgtgggcattttggaaatatat
gataaaccacgcaaagggaaaaaatatgaaataaaaccgatccttttaagtacagttagg
ccaatggtaattgattcaattgatataaaaagagaaactgatatttctccgggtgacgat
aaagcgttggagacatatttgagatcaaaggttaacgaaatgattgtgcgtgcacaagaa
ctatggaatgaaaataacccagatggcgaaaatcctccactgcctttaatcagattaaat
gtagaaatgagtagagaatataaccgtatacgaactagtttatttgaacaagaatttaaa
aaccgtattgcaaatagtgatagcaatggtcaaaaaatcgtgacttaccattataaagaa
gctgaaagatctcaaaatcaacgatttgtcgccccgttagactttggggatgaagagata
tcacagaaaaacgctacatattttgtcattggacaacttgcaaaaacgttaaaagagaag
ccatctcatttttttccagaaaatggaattttaaactctatcgatctctatgtcaataag
aatgatgaaaatgccgttagagatttttttgaatcgactagagaacatatgaaaaatcat
ttaataaatcatggaataccagaacattcgttacctggagaatcagaaatcaagaatgtg
ataacattggaaaaagataggcttaaccaagaatggtctacacaatttgatcctgaacat
tatttagaaaagtcgagaacagagcaaagcattacatcagtggcggctgtatcaactaca
agtcacggtcgtggtcgtggtcgtgggcgcggtcgtgggcgcggcagaggcagaggtcgt
ggttctagatccactgcagttgaagaattggatgaggatgaagatatggatttagatagt
ggaacaagagttaactcgcaaaacaaatttagtacttctagaggaagtcagcaggtaact
attgatgaacaagatgaatacgttgaggacgttcattttgatctgccgaaaagtagtgtt
acaacaagaagtaggaattctcgagcgcgtgatcgcatgatagttatcgatgaggaacaa
gaatttaatgatgaatttgataatgaattggaagcccctgcaccatcaactaaaaaccgc
actactcgaacgcgcgatcaggggcgtgggcgtggacgagtagctgcaatcatcgacttg
gaacaagatgataatgaattacctgcaagaacttcatcagtcaaaagtagtggtccaggt
cgtagacgtggtcaagtagctgcagttaatgatggagaccatgaatctgaagataataac
ggatcgactacaagaatatcagccaaaagttcaacacgcgatcaaggacgtgcgtgcgat
gaagaaaaagattttgaagacgaagattatgtaccaactagtaaaactacacgtggtcgt
ggtcgtggccgtggcagaggccgaggtcgcggccgtggaagtcaaactcaagatcgtgaa
gaacaaatggaaattgacaatgaattcactggagataatcctagagctgttacacccgaa
acatacaatcaaattaaatcagtttcaaaagcgtctgcaggagtaaaaagaagaattaat
agtatatttgattcaccatcaaaaagaataatgactgataccacgaaattatcgatattg
gaacaacgaagctcaccttcagtgacttcgcaacaaagtcaacgtacacaaacttttcat
gaattggatgatgatgatctttttgactaa
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