Rhizophagus irregularis: OCT59_024531
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Entry
OCT59_024531 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rie04121
]
OCT59_024531
Enzymes [BR:
rie01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
OCT59_024531
Ubiquitin system [BR:
rie04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
OCT59_024531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_ARI1
IBR
Ariadne
IBR_1
IBR_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
Zn_Tnp_IS91
Motif
Other DBs
NCBI-GeneID:
36873566
NCBI-ProteinID:
XP_025181199
LinkDB
All DBs
Position
4:5745577..5748161
Genome browser
AA seq
515 aa
AA seq
DB search
MSDMSDEDLTFEDSYRDSDEDVEDVEDEDDYVDDDDTDLNFTDVVAEKDRKKNYEVDFIV
HSIEGIVKNQDDEVTHVSNILGIQKQHAATLLRHFRWNKERLIERYMEDSTEVLNKAGVI
TDNARTPKFIKIPGFICDICCDDDEDLDTLALSCGHRFCKNCYEHYLTQKIKEEGESRRI
LCMASKCNVIVDEKTVELAVNKDIHERYRTLLNRTYVDDNEYLRWCPAPSCEYAIECHVP
QTSLTSIVPTVECVCTHRFCFGCGFPDHQPSICVLVKKWIKKCEDDSETANWISAHTKEC
GKCHSTIEKNGGCNHMTCRKCKYEFCWVCMGPWSEHGTSWYNCNRYDEKTSIDARDQQAK
SRASLERYLHYYNRFANHEQSAKLDRELYNKTEKKMEEMQQTSDLSWIEVQFLKKAVDIL
VQCRMTLKWTYAFAFYLARNNQTDIFEDNQRDLEMAVEQLSELLEKPIEAEKIAELKQQV
LDKTVYVGSRREVLLEDTAKGLLESRWEFQVDIKS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacatgtctgacgaagatctcacgttcgaagattcttatcgagactcagacgaa
gatgtcgaagatgtcgaagatgaagatgactatgtagatgacgatgataccgatctcaac
tttacggacgtcgtagcggaaaaagaccgtaaaaaaaattatgaagtggactttattgtt
cactctattgaaggtatcgtgaagaatcaagacgatgaagttactcacgtatccaatatt
ctcggtatccagaaacaacatgctgcaacgttgcttcgtcattttcgttggaataaggag
agacttattgaacggtacatggaagattcaactgaggtcttaaataaagctggtgtcata
actgataatgccagaacaccaaaatttataaagattcctggttttatttgtgatatttgc
tgtgatgatgatgaagatttagataccttagctctatcttgtgggcatagattttgtaaa
aattgttacgaacattatttgacacaaaagatcaaagaagaaggtgaaagtcgcagaatt
ttatgtatggctagcaaatgtaacgtaatagtagacgaaaaaactgttgaattggcggtg
aataaagatatacatgagagatatcgtacgttactaaatcgtacatacgttgatgacaac
gaatatttacgatggtgtcctgctcctagttgtgaatatgctatagaatgtcatgtacct
caaacttcacttacaagcattgtcccgacagtcgaatgcgtatgtacacatcgcttttgc
tttggctgtggtttcccagaccatcagccctccatttgcgttcttgtaaaaaaatggatt
aaaaaatgtgaagatgattccgaaacagctaattggatttctgctcatacaaaagaatgc
ggaaagtgtcattcaaccattgaaaagaatggtggatgtaaccatatgacttgtcgtaaa
tgcaaatatgaattttgctgggtttgtatgggtccttggtcagagcatggcaccagctgg
tacaattgtaatcgttacgacgaaaagactagcatagatgcaagagatcaacaagccaaa
tctcgtgcttctttggaacggtaccttcattattataatcgatttgccaatcatgaacaa
tcagcgaaattggatcgtgaattgtataacaagactgagaaaaagatggaggaaatgcaa
caaacctctgatttatcttggattgaagttcagttccttaagaaggctgttgatattctt
gttcaatgccgtatgacacttaaatggacatatgcctttgctttttatcttgctcgtaac
aatcaaactgatatctttgaagacaatcaacgtgatcttgagatggcagtcgaacagctt
tcagagttattggaaaaacctattgaagccgaaaaaattgcagaattgaaacaacaagtc
ttggataaaactgtttatgttggaagccgtagagaagtattattggaagataccgctaaa
ggattacttgaatctcgttgggaatttcaagtagatattaaaagttag
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