KEGG   Rhizophagus irregularis: OCT59_024909
Entry
OCT59_024909      CDS       T10295                                 
Name
(RefSeq) uncharacterized protein
  KO
K12847  U4/U6.U5 tri-snRNP-associated protein 2
Organism
rie  Rhizophagus irregularis
Pathway
rie03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rie00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    OCT59_024909
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rie03041]
    OCT59_024909
Spliceosome [BR:rie03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    OCT59_024909
SSDB
Motif
Pfam: UCH zf-UBP UCH_1 DOCK_N Acetate_kinase pYEATS TUG-UBL1
Other DBs
NCBI-GeneID: 36865645
NCBI-ProteinID: XP_025182975
LinkDB
Position
5:1738099..1740542
AA seq 491 aa
MSNMNNDQKIVPKRDLSDDAEAMIEDNDDITQPDTKRIRVGTSANSSSDLYLDTINRHML
DFDFEKVCSVSLSNLNVYACLVCGKYFQGRGRQSHAYFHSLHEDHHVFINLHTLKVYVLP
DGYEVKDPSLNDIRYVLHPTFTKEQVANLDQNIRQSYDLNNKKYLPGFVGLNNVKANDYV
NVIIQALAHIPPLRDYFILQNLETRSQLVQRFSTLVRKIWNPKAFKGQVSPHELLQEIVN
ASNKKFKLSEQSDPLEFLSWFLNTLHKDLGGIKKQNSSIIHRIFQGEVKVEEQSLITKEN
ADEEDRLLFDVDREISVKKFPFLFLTLDLPAPPLFKDEVEKNIIPQVALTTILAKYDGRA
AHESAGTLKRFQLTRLPNYIIFHIKRFTKNNWSEEKNPTIVNFPIKNIDMSEYLENPDEE
KFNTHYDLIANICHEGKPGKGNGIYKVHVQHRGKDQWYQIQDLIVEEINAQMIFLSESYI
QIWERKQQDLY
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgtctaatatgaataatgatcaaaaaatagttccaaagcgtgatttgagtgatgatgca
gaagctatgatcgaagacaatgatgatataactcaacctgatacaaaaagaattcgtgtc
ggaacttcggctaatagctctagcgatctctacctagacactataaaccgtcatatgttg
gactttgatttcgaaaaggtctgctcagtttctttatcaaacttaaatgtatatgcgtgt
ttggtgtgtggtaaatacttccaaggacgaggacgtcaatctcacgcgtacttccatagc
ttacatgaggatcaccatgttttcattaatttacatacccttaaggtatatgttttacct
gatggatatgaagtcaaggatccatcattgaatgatattagatatgtacttcatccaacc
tttacaaaagaacaagtcgcgaatttggatcaaaatataagacaatcatacgatttaaat
aataaaaaatacttgccaggttttgtaggcctcaataatgtaaaagctaatgattatgtt
aatgtcataatacaagcgctggcacacattccaccgcttcgggattacttcatcttacaa
aatctcgaaactagatctcaattagtgcaaagattcagtactctggttagaaaaatttgg
aatcctaaggcattcaaaggccaagtcagtccacacgagttacttcaggaaattgttaac
gcaagtaacaaaaaattcaaactttctgaacaaagtgatcctcttgaatttctgtcttgg
tttttgaatacattacacaaggatttgggtggaatcaagaaacaaaattcaagcataatt
catagaatatttcaaggagaagttaaagttgaagaacagtcgcttattacaaaagaaaat
gccgatgaagaagatcgactattatttgatgttgacagggaaatttcggtcaaaaaattc
ccttttctttttttgacattggatttacctgcgcctcctttatttaaggatgaagttgaa
aagaatattattcctcaagttgccttgacaacgatactcgctaaatatgacggtcgtgct
gctcatgagtcggccggaactttgaaaaggtttcaattgactcgattaccaaattatatc
atttttcatatcaaacgttttactaagaacaattggtctgaagagaaaaatcctactatt
gtcaacttcccaatcaaaaatatcgatatgagcgaatatcttgaaaatccagatgaagaa
aaatttaatactcattatgatttaattgcgaacatttgtcacgaaggtaagccgggtaaa
ggtaatggaatttataaagttcatgttcaacatcgtggaaaagatcaatggtatcaaatc
caagatttaattgtcgaagaaattaacgcacaaatgatctttttatccgaaagttatatt
cagatatgggaaagaaaacaacaggacttatattaa

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