Rhizophagus irregularis: OCT59_024910
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Entry
OCT59_024910 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
rie Rhizophagus irregularis
Pathway
rie03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
OCT59_024910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rie03021
]
OCT59_024910
03036 Chromosome and associated proteins [BR:
rie03036
]
OCT59_024910
Transcription machinery [BR:
rie03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
OCT59_024910
Chromosome and associated proteins [BR:
rie03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
OCT59_024910
PBAF complex
OCT59_024910
GBAF(ncBAF) complex
OCT59_024910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
36865644
NCBI-ProteinID:
XP_065991742
LinkDB
All DBs
Position
5:1740661..1743494
Genome browser
AA seq
509 aa
AA seq
DB search
MNHQRGPRPVAPSGYPNQYSTNAFVLTPGVHPQYQHRPASFPYGQSQYIQPHAQMQTSQR
ITMATANQQHLIQQHAGPSAATQGPMIIRKRNPEPMLNSGMQQAKKKRALDRNIPEKLDT
LVPESLLYTELQNFEKRLDATIMRKRLEVQETINKPMKIKRTLRVFISNTAVNQNPQRDS
ESNDIGFGDTNVPAWILKIEGRLLDPSNSSKTNKIPSRKFSTFFISIIVDLDRDPEMYPD
GNTIEWNKTNNTEGVDGFEIKRKGDTNVKCKIFLNLDKQPPRYKLSEDLASLLGIKEETK
TGVILALWQYIKHHNLQDNIEDKRFINNDARLESLFNCPRMAFPQIPELINMHLQPIDPI
TIDYTIRVDKEFHQSRYAYDIEVEVDDPNKLRLLSVFNNNASQREVQNLDDKIVQCVQSI
NNSKTKRDFLLNFAKSPVEFINKWVASQSRDLEVILGESHVNLEEQRRSEFYKQSWVNEA
VFHYATAQTQRKMHELLGSSSNIRNDQRR
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatcaaagaggtccacgcccagttgcaccttcgggttatcctaaccaatattca
acaaatgcttttgttctcacaccaggagtacatcctcagtaccaacatcgtccagcttca
ttcccttacggacaatctcagtatattcaaccacatgcacaaatgcaaacatcgcaaaga
ataacaatggcaaccgcaaaccaacagcatttaattcaacaacatgctggtccttcggca
gcgacacaggggccaatgataataagaaaacgcaatcctgaacctatgctgaatagcggt
atgcaacaagcgaagaaaaaaagagcacttgaccgaaacataccggagaaacttgataca
ctcgtacccgagtctcttttatatacggaacttcaaaattttgaaaagaggctagacgcg
acaattatgagaaaacgccttgaagtacaagagacaattaataaaccaatgaagattaaa
cgcacactacgagtctttatctccaacacagcagttaatcaaaatcctcagagagatagt
gaaagtaatgacattggatttggagacacaaatgttccagcttggatattgaaaattgag
ggaagactacttgatccatcaaattcatccaagactaacaaaattccgtctcgaaaattt
tctactttttttatttctattattgttgacttggatagagaccctgaaatgtatccagat
ggaaatacgattgagtggaataagaccaataatactgaaggagttgatggattcgagatt
aagcgaaagggagataccaatgttaaatgtaaaatatttttaaatttagataaacaaccc
ccaagatataaattgtctgaagacttggcatcattgctgggaataaaagaagaaacaaaa
actggggttattttggcattatggcaatatatcaagcatcataatttacaagacaatatt
gaagacaaaagattcattaataatgatgcacgtttagaatcactttttaattgtccccga
atggcttttccacaaataccggaattaattaatatgcatttacaaccaattgaccctata
accattgattatacaattcgagtcgacaaagaatttcaccaatcaagatatgcttacgac
attgaagttgaagttgatgatcctaacaagttgagacttctttctgtttttaataataat
gcgagccaaagagaagtacagaatttggatgacaagattgtccaatgtgtacaaagtata
aataattcgaaaacaaagcgcgactttttattaaatttcgcgaaatcacccgttgaattt
attaataaatgggttgcaagtcaaagtcgagatttagaagtcatattaggggaaagtcac
gtcaatcttgaagaacagagaagatccgaattttacaaacaaagttgggtcaatgaggct
gtattccattacgctactgcacagactcagagaaaaatgcatgaattattaggatcaagt
agcaatattagaaatgatcagagaagataa
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