Rhizophagus irregularis: OCT59_025029
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Entry
OCT59_025029 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K09275
transcription factor CP2 and related proteins
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rie03000
]
OCT59_025029
Transcription factors [BR:
rie03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Grainyhead
OCT59_025029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CP2
GTP1_OBG
Motif
Other DBs
NCBI-GeneID:
36876848
NCBI-ProteinID:
XP_025175583
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Position
5:complement(2286989..2289937)
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AA seq
545 aa
AA seq
DB search
MLPVSPHMHSNYGGFNPHFGPTGGYPPHAIRYHPDAYSPTTYPASPSNTAYKSHDSHQPP
QLMSQHGQLMPTTSLPPVSPVSGSSTQPDLSPVNSPLGNNGGNGYHMTHHIQHQTNTTPS
TTYHNPEQAQQAQQSQQSQQSPNQEASNYSSTVTPVSMPSPPESIPPHQSSNLRFEILLE
SPTASAQRIDETPITYLNKGQYYAIGLQDHDKYDAEFTTVIKVMFHDDAHRKMASTYWGF
WLTQQASPKNARAVDIDKAASTGISNLETKIFDRVQFQWNGKKGAKIFVRFNCLSTDFSR
IKGVKGIPLRIHVETKCDSGAICTSLEKSFAKIKLFRDKGAERKNKDDQKHLEKMCEKMR
AKSQETTPMIMMYAPPNPVTVFNECTRNNNVSDDEEILNLSETLNNLDPDVEGSELMTLQ
LGKRKRFSMGSDLLEPLDCDPTYIPHLRKRRAVLCIYVKLPGEAVYKAVYLNHLTVQDLI
AKLTDKLSEKIDLQGQPITNVIRCTKRNLTVRIDDDSIHQIEDETDMEVEFQIGQDGNVQ
LTLKY
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgttaccagtatcaccgcatatgcattcaaattacggtggttttaacccacatttcgga
ccgacaggaggatatcctccccatgctatcagatatcatccagatgcttattctccgaca
acatatccggcgtcaccgtctaatactgcctataagtctcatgattcacatcaacctcct
cagttaatgagtcaacatggtcaattaatgccaacaacttcacttccacccgtgagtcct
gtttctggatcatcaacacaaccagatcttagtccagttaattccccacttggtaacaac
ggtggcaacggatatcatatgacacatcatattcaacatcaaactaataccaccccaagt
actacttatcataatcctgaacaagcccaacaagcccaacagtctcaacagtctcagcaa
tctccaaatcaagaagcgtcaaattatagtagtactgttactcctgttagtatgccctcg
ccgcctgagagtattcctcctcatcaatcatcaaatttgcgatttgaaatacttctcgaa
tctcctactgcttctgctcaacgcattgacgaaactcctataacataccttaacaaaggt
caatattatgcaattggattgcaagatcatgataagtacgacgccgaatttacgacagtt
atcaaagtaatgtttcatgatgatgctcatcgtaaaatggcttccacttattgggggttc
tggttaacacaacaagcatcacctaaaaatgccagagctgttgatattgataaagctgca
tcaactgggatcagcaatttggaaacaaaaatttttgatcgtgtacagttccaatggaat
ggcaagaaaggtgcaaaaatttttgtacgtttcaattgcctatcaacagacttttctcga
ataaaaggggttaaaggtattccactaagaattcatgtcgagacaaagtgtgatagcggt
gcaatctgtacatctcttgaaaaatcctttgctaagatcaaattattcagggacaaaggt
gccgaacgtaaaaataaagatgatcaaaaacatttagaaaaaatgtgcgagaagatgaga
gctaaatcacaagaaacaacgccaatgataatgatgtatgctccaccaaatcctgtgact
gtatttaatgaatgcacgagaaataataacgtgtcggatgatgaagaaattttaaatctc
tcggagactttaaataatcttgatccagatgtagagggaagtgagctaatgactcttcag
ttgggcaaacgaaagagattttcaatgggatccgatcttttggaacctttagattgcgat
cccacttatattccacatctaaggaaacgtcgtgcagttctttgcatttacgtcaaactg
ccaggtgaagctgtgtataaagctgtttatcttaatcatctcactgttcaagatcttatc
gcaaaacttactgataaactctcggagaaaattgatcttcaaggtcaaccgatcacgaat
gtaattaggtgcactaaacgtaatcttaccgtccgtattgatgatgattctattcaccaa
attgaggatgaaacggacatggaagttgaatttcagatcggacaagatggaaacgtacag
ttaacattgaaatattaa
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