KEGG   Rhizophagus irregularis: OCT59_025131
Entry
OCT59_025131      CDS       T10295                                 
Name
(RefSeq) uncharacterized protein
  KO
K11800  DDB1- and CUL4-associated factor 5
Organism
rie  Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:rie00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rie04121]
    OCT59_025131
Ubiquitin system [BR:rie04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     OCT59_025131
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EIPR1 Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_RIG_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_DCAF12 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 36880149
NCBI-ProteinID: XP_025179250
LinkDB
Position
5:<2722594..2725991
AA seq 603 aa
MSDVISLTKSPSSKKGFVSLLEKTNLSVIQPKMKKDLYYAAIKVGGNFEFSRNLKGHFSC
VNAINFSNGDARLLVSGGDDRRVLIWDVHGDIENTKPKKCFKGHHGNIFGTVFDSTNRHV
LSCGNDKLIIYHDLEHESVSKTFLGHEDAVHSIAFDPFNDNLFLSASQDGTVKLWDIRCN
FQCQGEIKGFAQMTHAQFSPTVEKQFVTSNDGGDIILRDTRTAFKSGEPLLTTSSSSKDF
LLKYVTTLTRNSRNVKPDISSVAFNPSGTLLCAIINHYRPTLYNVFDEKPLCTFSSDYDF
ETQIGYKNDCTFKQGYFGGPDGDYFLCGSDDFRVYIWKVPDIETMINERSFTKNLDDLDD
EIYFIDDDMVIDPLNNSTPQYVLNGHRSIVNSAIWHPHVPLIFSSGVEKIIKVHSAFPFS
NKDCESKIPQPPRSRFRRGEISFRANEYEENMEEDLSTLKFFDLMLMTEEHEDFYWGNDS
FDDSDNSTLSLSSYFFMRDDDDDNDDDDDDKEDEDDGESDGEETDDDSEGLPSMGDYENY
AYSSSDYEETTDRNDVSFESDMDTSDTDNNIYQLYRSFAMCSDELTDDDDDYDDDEMNIE
ILI
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgagcgatgtaatatcacttactaaaagcccttcaagtaaaaaagggtttgtttcttta
ctcgagaaaactaatttaagcgtgatacagcctaaaatgaagaaggatttgtattatgct
gcaattaaagttggaggaaattttgaattttcgcggaatttaaagggtcatttctcatgt
gttaatgcgataaattttagtaatggtgacgcgcgattattagtgtctggtggcgacgat
agacgagtattgatttgggacgtacatggtgatattgaaaatactaaacctaagaagtgc
ttcaaaggtcatcacggtaatatatttggtacagtttttgattctacgaatcgtcatgtt
ttatcttgtggaaatgataagttaataatttatcatgatttggaacatgaaagcgtttcg
aagacatttttgggacatgaagatgctgtgcattcaattgcctttgatccatttaatgat
aatttattcttgtccgcaagtcaagatggtacagtgaagttatgggacatacgttgtaat
tttcagtgtcaaggagaaattaaaggttttgcacaaatgacgcatgctcaattcagtccc
accgttgagaaacaatttgttactagtaatgatggtggtgatataatactacgagatact
agaacggcttttaagtctggtgaacctcttttgactacttcctcatcttcaaaagacttt
ttattaaagtatgttactactttaacgcgtaattctagaaatgttaaacctgacatatct
tcagtagcatttaatccatccggaactttattatgtgctattataaaccattatcgtcca
acattatataatgtttttgacgagaaacctttatgtactttttcatcagattatgatttc
gaaacacaaattggatacaaaaatgactgtacttttaagcaaggttattttggtggtccg
gatggagattatttcctttgtggaagtgatgattttagagtttatatatggaaagttcca
gatatagaaactatgattaatgagcgatcgttcacaaaaaatctagatgatttagatgat
gaaatatattttattgatgacgatatggtaattgatccattgaataattcaaccccacaa
tatgtgcttaatggtcatcgttcaatcgtcaattcggcaatttggcatcctcatgttcct
ttgatattttcatcaggtgttgaaaaaataataaaggttcattccgcttttccattttca
aataaagattgtgaatctaaaattccgcaaccgcctaggtcgaggtttagacgtggggag
attagttttcgtgcaaatgaatatgaagaaaatatggaagaagatttgtcaacattgaaa
ttttttgatttaatgcttatgaccgaagagcatgaagatttttattggggaaatgattca
tttgatgactctgataattcaacactttcattatcttcatatttttttatgcgtgacgat
gatgatgataacgacgacgacgatgatgataaagaggacgaagatgatggagaatctgat
ggtgaagaaactgatgatgatagtgaagggttaccatctatgggtgattatgaaaattat
gcatattcgagttcagattatgaagagacaactgatagaaatgatgtttcttttgaatca
gatatggatactagtgatacggataataatatataccagttatataggtcgtttgcaatg
tgtagtgatgaattaactgatgatgatgatgattatgacgatgacgagatgaatattgaa
attttaatttaa

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