Rhizophagus irregularis: OCT59_025131
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Entry
OCT59_025131 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rie04121
]
OCT59_025131
Ubiquitin system [BR:
rie04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
OCT59_025131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
36880149
NCBI-ProteinID:
XP_025179250
LinkDB
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Position
5:<2722594..2725991
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AA seq
603 aa
AA seq
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MSDVISLTKSPSSKKGFVSLLEKTNLSVIQPKMKKDLYYAAIKVGGNFEFSRNLKGHFSC
VNAINFSNGDARLLVSGGDDRRVLIWDVHGDIENTKPKKCFKGHHGNIFGTVFDSTNRHV
LSCGNDKLIIYHDLEHESVSKTFLGHEDAVHSIAFDPFNDNLFLSASQDGTVKLWDIRCN
FQCQGEIKGFAQMTHAQFSPTVEKQFVTSNDGGDIILRDTRTAFKSGEPLLTTSSSSKDF
LLKYVTTLTRNSRNVKPDISSVAFNPSGTLLCAIINHYRPTLYNVFDEKPLCTFSSDYDF
ETQIGYKNDCTFKQGYFGGPDGDYFLCGSDDFRVYIWKVPDIETMINERSFTKNLDDLDD
EIYFIDDDMVIDPLNNSTPQYVLNGHRSIVNSAIWHPHVPLIFSSGVEKIIKVHSAFPFS
NKDCESKIPQPPRSRFRRGEISFRANEYEENMEEDLSTLKFFDLMLMTEEHEDFYWGNDS
FDDSDNSTLSLSSYFFMRDDDDDNDDDDDDKEDEDDGESDGEETDDDSEGLPSMGDYENY
AYSSSDYEETTDRNDVSFESDMDTSDTDNNIYQLYRSFAMCSDELTDDDDDYDDDEMNIE
ILI
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgtaatatcacttactaaaagcccttcaagtaaaaaagggtttgtttcttta
ctcgagaaaactaatttaagcgtgatacagcctaaaatgaagaaggatttgtattatgct
gcaattaaagttggaggaaattttgaattttcgcggaatttaaagggtcatttctcatgt
gttaatgcgataaattttagtaatggtgacgcgcgattattagtgtctggtggcgacgat
agacgagtattgatttgggacgtacatggtgatattgaaaatactaaacctaagaagtgc
ttcaaaggtcatcacggtaatatatttggtacagtttttgattctacgaatcgtcatgtt
ttatcttgtggaaatgataagttaataatttatcatgatttggaacatgaaagcgtttcg
aagacatttttgggacatgaagatgctgtgcattcaattgcctttgatccatttaatgat
aatttattcttgtccgcaagtcaagatggtacagtgaagttatgggacatacgttgtaat
tttcagtgtcaaggagaaattaaaggttttgcacaaatgacgcatgctcaattcagtccc
accgttgagaaacaatttgttactagtaatgatggtggtgatataatactacgagatact
agaacggcttttaagtctggtgaacctcttttgactacttcctcatcttcaaaagacttt
ttattaaagtatgttactactttaacgcgtaattctagaaatgttaaacctgacatatct
tcagtagcatttaatccatccggaactttattatgtgctattataaaccattatcgtcca
acattatataatgtttttgacgagaaacctttatgtactttttcatcagattatgatttc
gaaacacaaattggatacaaaaatgactgtacttttaagcaaggttattttggtggtccg
gatggagattatttcctttgtggaagtgatgattttagagtttatatatggaaagttcca
gatatagaaactatgattaatgagcgatcgttcacaaaaaatctagatgatttagatgat
gaaatatattttattgatgacgatatggtaattgatccattgaataattcaaccccacaa
tatgtgcttaatggtcatcgttcaatcgtcaattcggcaatttggcatcctcatgttcct
ttgatattttcatcaggtgttgaaaaaataataaaggttcattccgcttttccattttca
aataaagattgtgaatctaaaattccgcaaccgcctaggtcgaggtttagacgtggggag
attagttttcgtgcaaatgaatatgaagaaaatatggaagaagatttgtcaacattgaaa
ttttttgatttaatgcttatgaccgaagagcatgaagatttttattggggaaatgattca
tttgatgactctgataattcaacactttcattatcttcatatttttttatgcgtgacgat
gatgatgataacgacgacgacgatgatgataaagaggacgaagatgatggagaatctgat
ggtgaagaaactgatgatgatagtgaagggttaccatctatgggtgattatgaaaattat
gcatattcgagttcagattatgaagagacaactgatagaaatgatgtttcttttgaatca
gatatggatactagtgatacggataataatatataccagttatataggtcgtttgcaatg
tgtagtgatgaattaactgatgatgatgatgattatgacgatgacgagatgaatattgaa
attttaatttaa
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