Rhizophagus irregularis: OCT59_025143
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Entry
OCT59_025143 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rie03021
]
OCT59_025143
Transcription machinery [BR:
rie03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
OCT59_025143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
A2L_zn_ribbon
BRF2-like_C_cyclin_rpt
Zn_Ribbon_1
RB_B
DZR
Motif
Other DBs
NCBI-GeneID:
36859567
NCBI-ProteinID:
XP_065991892
LinkDB
All DBs
Position
5:2777560..2780583
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AA seq
677 aa
AA seq
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MTCSHCGENRIEYDTAAGHAFCPKCGFVVEESKIVSEVTFGESASGAAILQGSYVGADQR
RARSAGPYRRHSSLDSREQTIANGRRQIQALATALRLADHLMEAAQRYFNLAITNNFIQG
RKTQLVVAACLYIVCRTEKTSHMLIDFSDILQVNVFTLGSTFLKLVRTLHLVLPLVDPSL
YISRFASLLEFGEETPKVVADALRLVQRMDRDWMQTGRRPAGICGACLLIAARMNNFQRS
IKEVIAVVKTADITIKKRLEEFKVTPTGKLSVQDFRNLWLEQQCDPPAFTRARKAAKIAK
DKRHAMAISDSTLNETGENYNQITTGSSNGEIIGSKRKRDLNDVDGDEIQLRQGISDFYE
DNSQAKTGESQNDEIAGKKRKRNLTEADKEGPSARIDKGKQPMCDFEAEVDRVLEEEVNS
FLGDKYLLKVSTDLEERALQSANSDSEDSKSDADQNEELGSDLDEDDEVKNAILTEDEVK
LKTQVWMELNGDYLREMEEKRKQQEIDRQNGIGVRRHKRPRKGRNADQMVASTPAEAARK
LFEERNLSKKINFKVLDNLLENLTESIPNTPTSWRDYDPTSISGSGIARSGTPVSNNRWS
DEEDYDWNHQSLKLNNKDSLNSTATTPGLTEDGDDYVEYDNNDIYGSESYEKYENDDHNY
DNEYEGDPYDESNEDDY
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgacttgctctcactgtggagaaaacagaatagaatatgatactgctgctgggcatgct
ttttgcccaaagtgtggttttgttgtcgaagaaagtaagatcgtttccgaggttactttt
ggagagagcgcgtcaggcgctgcaattttacaaggatcgtatgttggagctgaccaaagg
agagctagatctgctggtccttatcgtagacattcaagcttggattctagagagcaaact
attgcaaatggacgacggcaaattcaagcattagctactgcgctaagacttgcggatcat
ctgatggaagctgcgcaaagatattttaatcttgcgattaccaacaacttcatccaaggt
agaaagactcaacttgttgtcgcggcttgtctctacatcgtatgccgtacggaaaagaca
agccatatgttgatcgatttttcggacattttacaagtaaatgttttcactttgggatca
acatttttgaaactagtaagaacacttcacctcgttcttccgttggttgatccatcatta
tatatctcaagattcgcgtccttattagaatttggagaggaaactccaaaagtagtggct
gatgcattgcgtctagtgcagagaatggatcgtgattggatgcaaactggtagaaggcct
gctggtatatgtggagcgtgtttattaattgctgctcggatgaataattttcagagaagc
ataaaggaagttattgctgttgtaaagacagcagacataactattaaaaaaagacttgag
gagttcaaagttacccccacaggtaaactttctgtacaagattttagaaatttatggctt
gaacaacaatgcgatccacccgcatttacgcgggcacgaaaggcggcaaaaattgccaag
gacaaacggcatgcaatggccatttctgattcgacattaaatgagactggtgagaattat
aatcaaataacgacaggttcatcaaatggggaaataattggttcgaaaagaaagagggat
cttaatgatgtggatggggatgaaattcaattaagacaaggaatatctgacttttatgag
gataattcccaagcaaagactggagaatcacaaaatgatgaaatagcaggtaaaaaaaga
aagagaaatctcactgaagcagacaaagaaggaccttcagcgcgtatagacaaaggcaaa
cagccgatgtgtgattttgaagcagaagtagaccgtgtattagaggaagaagtgaactcg
ttcctaggtgacaaatatttgttgaaagttagcaccgatttggaagaaagagctctccaa
agtgcaaattcggatagcgaagatagtaaatctgacgccgatcagaacgaagagctaggg
tctgatcttgatgaagatgatgaagtaaaaaacgccattttaactgaggacgaagtcaaa
cttaaaactcaagtttggatggagctaaatggggattatttgagggagatggaggaaaaa
agaaaacagcaagaaatcgatcggcaaaatgggattggagttcgtagacataagcggcca
agaaaaggcagaaatgctgatcagatggttgcgagtacaccagcagaagccgcaaggaaa
ctttttgaagagagaaatctatcaaagaaaattaactttaaggtgctggataatctcttg
gaaaacttaacagaaagcattcccaacactccaacatcatggcgagattatgatcccaca
agcataagtggctcaggaattgcacgtagcgggactccagtaagcaataataggtggtct
gacgaggaagattatgattggaaccatcaatctttaaagctaaacaataaggattcgtta
aatagcactgcaactactcctggactgacggaagacggtgatgattatgtcgaatatgat
aataatgatatatatggtagcgaatcatatgaaaaatatgaaaatgacgatcataattat
gataatgaatatgaaggggatccctatgatgaatccaatgaggatgactattga
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