Rhizophagus irregularis: OCT59_026381
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Entry
OCT59_026381 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K10870
RAD51-like protein 2
Organism
rie Rhizophagus irregularis
Pathway
rie03440
Homologous recombination
rie03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OCT59_026381
03460 Fanconi anemia pathway
OCT59_026381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rie03400
]
OCT59_026381
DNA repair and recombination proteins [BR:
rie03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
OCT59_026381
FA (Fanconi anemia) pathway
Other FA pathway factors
OCT59_026381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
ATPase
AAA_25
RecA
DnaB_C
IMS_HHH_1
SAM_EPH
AAA_24
TrwB_AAD_bind
HHH_5
SctB2
TfoX_C
DUF4332
AAA_33
Motif
Other DBs
NCBI-GeneID:
36863726
NCBI-ProteinID:
XP_025187191
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Position
6:2988696..2990557
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AA seq
346 aa
AA seq
DB search
MSARLVSSLNLRPSTRTKLQKAGFQTVKDLQETTPIELSKEIGISNNEALNILQQIKKNK
VTSISASEALQQERKLCPISTSCEAMDQMLGGRGVPVGKITEFCGAPGMGKTQLGMQLCV
NVQIPQNLSGPEGEAIFIDTEGSFIAQRAAEIARATINKLNENSVTECDPPMNFDIVMSK
IYVSKVHNCDELIALIKVLDEFLQEHPRVKLLVIDSIAFHFRQQFDDMALRTRLLNGLAQ
DLNKFAQSYELAVVLFNQMTTKFIISGKYNLKDQAALVPALGESWGHQCTNRIVLYWRNE
IRCAQLVKSPSLQETTVHYQINSTGVRDYQADSLNSKRRWEELYDI
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaaggctagtatcttccctaaatttacgtccaagcacccgaaccaaattacaa
aaagccggctttcaaacagttaaagacttgcaagaaactactccaatagaattgagtaaa
gaaatcgggatatcaaacaatgaagcattaaatatattacaacaaattaaaaaaaataaa
gttacatcaatatctgcttcagaagcactacaacaagaacgtaaactatgtcccatatct
acttcatgtgaagccatggaccaaatgcttggtgggcggggagttcccgtagggaaaata
actgaattttgtggtgctcctggtatgggtaaaacacaactagggatgcaactatgcgtt
aatgtccaaataccacaaaatttatctggtccggaaggcgaagcgatatttatagatacg
gaaggtagttttatcgctcagcgtgctgctgaaatcgcaagagctacgataaataaacta
aacgaaaatagtgtgactgaatgtgatccacccatgaatttcgatatcgttatgtcaaaa
atttacgtgtctaaagttcataattgtgatgagttaatcgcacttataaaagttctagac
gaatttttacaggaacatccacgagtaaaacttcttgttattgattcgattgcatttcat
tttcgtcaacaattcgatgatatggcgcttcgaacgcggctgttaaacggattagctcag
gatttgaataaatttgctcaatcatatgagctcgcagttgttttatttaatcaaatgact
actaaatttataatatctggaaaatataatctcaaagatcaggctgctttagtccccgca
ttaggtgaaagttggggtcatcaatgtacaaatcgtatagtactttattggcgcaatgaa
attcgttgtgcacaacttgtcaagtctccgagcttacaagaaactaccgtacattatcaa
attaattcgaccggtgttcgtgattatcaagcagactctcttaacagcaaaagaagatgg
gaagaattatatgatatttga
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