Rhizophagus irregularis: OCT59_026425
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Entry
OCT59_026425 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K15176
RNA polymerase-associated protein CTR9
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rie03021
]
OCT59_026425
Transcription machinery [BR:
rie03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
OCT59_026425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_12
TPR_8
TPR_14
TPR_16
TPR_CcmH_CycH
TPR_11
TPR_Slam
TPR_6
ANAPC3
TPR_9
TPR_15
TPR-S
Wzy_C_2
ARM_TT21_4th
TPR_10
SPO22
Motif
Other DBs
NCBI-GeneID:
36859307
NCBI-ProteinID:
XP_065992701
LinkDB
All DBs
Position
6:complement(3165217..3168408)
Genome browser
AA seq
967 aa
AA seq
DB search
MSVGSIQKVVEIPLPISNQTVEIDCDQLGTAGETLNMFGNEVIDMKYWIHFALFYNVNRE
SPEEAVSILERGLLSPGSIDERCKCLNLLASTYFKMYKAPKYQANIDKKNYFLVQATEKF
NEASQLNPQNLISLVGKGLIYLAKKDVVQAGREFSNALRISPNFIPALFGLARIQYSHKA
FKDALATYQRIARLNPFMTHPDPRIGIGLCLNKLNRFNEAVQAFDRAITMNPNSVPANIL
LATIEFDIAKQLDPYKDVSDEERLANYCAGMERVELALNIDPTKSSALILLAHGFYLREE
MDFALEALRRAEKYADSRFMQSETHYQLARAYHFIEDYDKAFYHYYHAIDINENHTSARY
GYGQMLIRNGYYEEAKDEFEKLWHLNIKNLDVTTVLCVLNAHIGFNDSDQSVRQKALNDF
DRISKAFVEDKYKNPDISTVKAWFFEQKKNPVKALASLKKAKELYERLHRSVPFELLNKM
GNMAFKAKLYEEAIDHYSEALRIIEKLPEKGGYRGLTVCYNKGRANEAAHKTEQARQIYK
KIIDRSPEFVLARLRLAAIEDKLKNHHKVDEIIHEVLDLDEENMEVKKIHALYQLRRGDF
QTPRNLLHSLAEKNDLVAITALGSLYLIRARLIKQEHEKPQREAYYKRAVELFQRALNLN
PRNIWAANGITVALAETGRMQEANEGFWKILQNCPKPEFNINYAHTCALLGDYGNAIRFY
EVASKKYQHRDYQIMEWIARVYYIIGKERKDLESLETALDWTQRALRLKPDHKIALHNLA
LLQQTRAQLIRDAKLGQSKVGQTAPITTASPNISLPELKKVIAWAQWSTKTFEEILKEEY
KKVMFDRDLVKNRVAFGNSMIGSFEKKKKELEVIEEQKEVERTERKRVEEEKQRIEEQRV
AEEAVLEEERRKRAAEEDRIRNERLQEYAAMQKILYAREEKSKRRRYSSDEEDRGMSSKK
SRRGFNI
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttggatctattcaaaaagttgttgaaattccgcttccgatctcgaaccaaacg
gttgaaattgattgcgaccagcttggaacagcgggggaaactctcaatatgtttggtaat
gaagtcattgacatgaaatactggatacattttgcacttttctataacgtaaatcgtgag
tcacctgaagaagctgttagtattttagaaagaggtcttttatcacccggttcaatagat
gagcgttgcaaatgcttgaacttacttgcaagtacttactttaaaatgtacaaagcgcca
aaatatcaagcgaacatcgacaaaaaaaattactttttggttcaagctacagagaaattc
aacgaagcttcgcagctcaatcctcaaaatcttatttctttagtggggaaaggtcttata
tatcttgcaaaaaaagatgtagtgcaggcgggtcgcgaattttcaaatgctttaagaatt
tcgccaaattttataccggctctttttggtttagctcgtatacaatattctcataaagct
ttcaaagatgctcttgcaacatatcaaagaattgctaggcttaaccctttcatgacgcat
ccagatccacgtattggaattggtctttgcctcaataaattgaatcggtttaatgaagca
gtccaagcctttgatagagctattacaatgaacccaaatagtgtacccgctaatatcctt
ctagctactattgaatttgatattgctaaacaacttgatccttataaagatgtatctgac
gaagaaagattagctaactattgcgcaggcatggagcgcgtggaattagctcttaatatt
gatcctaccaaatccagtgcactaattcttttggcgcacgggttctatcttcgagaagag
atggattttgctctagaagctttaagacgagccgaaaaatatgccgattccagatttatg
caatccgaaacgcattatcaacttgctagagcttatcattttatagaagactatgataag
gctttttatcactattatcatgcaatagacattaatgaaaatcatacttcagcgcgttat
ggatacggacaaatgttgattcgtaatggttattatgaagaagctaaagatgaattcgaa
aaattatggcacctaaatatcaaaaatttagacgtcaccacagttttatgcgtattgaac
gctcatattggctttaatgactcggatcaatcagttaggcaaaaagcattaaatgatttc
gatagaatctcgaaagctttcgtagaagacaaatataagaatcctgacatttcaacagta
aaggcttggttctttgaacaaaaaaagaatccggttaaagcgcttgcatcattaaagaaa
gcaaaggaattatatgaacgccttcatagatcagttccatttgaacttctcaataaaatg
gggaatatggcttttaaagctaaattatatgaagaagcaattgatcattatagtgaagcc
ttaagaataattgagaaattgccggaaaaggggggatatcgcggattaacagtgtgttat
aataaggggcgtgctaatgaagccgcacataaaacagagcaggcaagacaaatttataag
aagattatagatcgtagccctgaatttgtgttagctcggttacgtctagctgcaattgaa
gataaacttaaaaatcatcataaagttgatgaaataattcatgaagttttagatcttgat
gaagagaatatggaagtcaaaaaaattcacgctttatatcagttgagacgtggagatttt
caaacacctagaaatcttttgcattctcttgcggaaaaaaatgatttagtagctataaca
gcattaggcagtttatacttaattagggcacgtctaatcaaacaagagcatgaaaaacca
cagagagaagcgtattataagagagctgtagaattgttccaaagagctctaaatttaaac
ccaagaaatatatgggcagctaatggaattactgtagcattagcagaaaccggaagaatg
caagaagcaaatgagggtttttggaaaatactccaaaattgccctaagcctgaatttaat
attaattatgcacatacttgtgctcttttaggcgattatggtaacgcaatacgtttttat
gaagtagcttccaaaaagtatcaacatagggattaccagataatggagtggattgcaaga
gtatattatataattggaaaagaacgaaaggaccttgaatcattagaaacagctttggat
tggacacagagagctcttcgattgaagccagatcataagattgcacttcataacctcgct
ttgctccaacaaacccgtgctcaattaatcagagacgccaaattaggtcaatcaaaagta
ggccaaacggctccaataaccacagcatctccaaatatttcattgccagaattgaaaaaa
gtaatcgcttgggcccaatggtctacaaaaacatttgaagagatacttaaagaagaatac
aaaaaagtgatgtttgatcgtgatctagtgaagaatcgtgttgcctttggaaactcaatg
attggaagttttgaaaaaaagaagaaagagctcgaagtaattgaagaacaaaaagaagtt
gaaagaacagaaagaaaaagggttgaagaagaaaaacaacgtatagaagaacaaagagtt
gcggaagaggcagtgttagaagaagaaagacgaaagagagctgcagaagaggatagaata
agaaatgaacgtcttcaggaatatgctgcaatgcaaaagatattatacgcacgagaggaa
aaatcaaaaagaagaagatactcctccgatgaagaagacaggggaatgtcttctaaaaag
tctcgtagaggttttaatatttaa
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