Rhizophagus irregularis: OCT59_028204
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Entry
OCT59_028204 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K10754
replication factor C subunit 1
Organism
rie Rhizophagus irregularis
Pathway
rie03030
DNA replication
rie03410
Base excision repair
rie03420
Nucleotide excision repair
rie03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OCT59_028204
03410 Base excision repair
OCT59_028204
03420 Nucleotide excision repair
OCT59_028204
03430 Mismatch repair
OCT59_028204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rie03032
]
OCT59_028204
03400 DNA repair and recombination proteins [BR:
rie03400
]
OCT59_028204
DNA replication proteins [BR:
rie03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
OCT59_028204
DNA repair and recombination proteins [BR:
rie03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
OCT59_028204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
RuvB_N
BRCT_2
AAA_30
AAA_19
ARL2_Bind_BART
PTCB-BRCT
Sigma54_activ_2
AAA_assoc_2
Motif
Other DBs
NCBI-GeneID:
36863473
NCBI-ProteinID:
XP_025187975
LinkDB
All DBs
Position
8:complement(1445257..1448428)
Genome browser
AA seq
970 aa
AA seq
DB search
MDIRNYFSAPNANKKLGKKTTTKKGSSKRRIQDSDDELGDHKASRTSTSQENSASKSNTS
TPTRQSTRLNRKNTKVDEPTTKKERERSDTPKSNKEDDFVTMKIDDETSPPQSTSENPEI
FTTPRRSRKTTEVTPKAVTKKRSKKIDDDDDFVLEEESKSQSPPKKTKREQKEAAYKPSS
NRAIKTPRSKRLNMEDEDDEKGIVQDNSEIGTTSIKVEDNDSPDIIVDRSNLNKADPTTP
ESKEIPQGEEMCLYGKTFVFTGDLSMDREEAQDLVKRHGGRVTSQPSSKTSYVIVGQDPG
PKKMEKVKQFKIKTLNEDQLLELIRTSPRKSDVDINKSQKSKTSKSKAPITKISDAITAV
ASPASSKASETVAQLWTEKYRPKLFRDFCGNQNLVKDMEKWLGVWDKKGFKFKNKEWMAA
LLIAGSPGIGKTSSVHLVANTQGYDVIELNASDTRSKKQLDTVIKVATKNTSITGFFQPF
NDKSSSKEHANEAQKKKTLILMDEIDGMSAGDKGGIAELIQLIKKTKVPIICICNDINAQ
KLKSLRPYCHELKFSKPRVEQVRSRIMTIATRENLQIQSTDVDELIRGANSDIRQILNLL
STWKINHDSINYDEIKGLNKNNEKHLKKNIFEIAKDFLGNDIWKSRKNTFNDKMKLYFQE
HDLAPLMIFENYIKMKPHTIPKFVKEYDNGDIKPDTLEKLASLEAFVKAADAMSCGDMVN
KRIHGPQQEWNLMPIHGFFSTIAPAYYVHGYSKGGQFGQYKFPSWLGQNSKAIKIHRQLK
EIQSHMRTKISADRSEVRESYIPTLRKALIKPLVDQKTEGVNDTIKIMDQYMITKEQFDV
IMEFKDDQTHYKPSEIASGLKSTFTKKYNASSHPLPFLNISSVITTKSRPVITADMDDFI
EEEVVPDDDDVIDDDDDLAKDRLIIQPSVGRGGGRGGGRGGRGGNRGGNRGGNRGERGAS
RRSRGRGGRK
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggatatccgtaattatttctccgcaccaaacgcgaataaaaagctaggaaaaaagact
actacaaaaaaggggagttccaagcgtaggatccaggattctgacgacgaactcggtgat
cataaggcctctagaacttctacttcacaagaaaattctgcttcaaaatctaatacttct
actccaacacgtcaatcaactcggcttaaccgaaaaaacaccaaagttgatgagccaaca
actaagaaagaacgggagcgttctgatacaccaaaatctaataaggaagatgattttgtg
acgatgaaaattgacgatgaaacatctcctcctcaaagcacctcagaaaacccagaaata
tttactactcctaggcgatcaagaaaaaccacagaagtaacgccaaaagcagtaaccaaa
aaacgctcaaaaaagattgatgatgatgacgattttgtattagaagaagaatcaaaatca
cagtcaccccccaagaaaacgaaacgtgaacaaaaagaagcagcatataaaccttctagt
aatcgtgctattaaaacgccccgatcaaaaagattgaatatggaagatgaagatgatgaa
aagggtatcgttcaagataactcggagatcggtaccacatcgataaaagttgaagacaat
gattcacctgatatcatagtagatcggtctaatttgaataaagctgatccaacgactcca
gaatcaaaagaaatacctcaaggtgaagaaatgtgcttatatggtaaaacctttgttttt
actggcgatttatctatggaccgtgaagaagctcaagatcttgttaaacgtcatggaggg
cgtgttacttcacagcctagttctaaaacttcatatgttatagtcggacaagatccagga
ccgaagaaaatggaaaaagttaaacaatttaaaattaaaactttaaacgaggatcagctt
ttagagttgattagaacttctcccaggaaatctgatgttgatataaataaatctcaaaaa
tcaaaaacttctaagtccaaagctcctattacaaaaatttctgatgcaattactgcagtc
gcttcacctgcctcatctaaggcctccgaaactgtcgcacaattgtggacagaaaagtat
cgacctaaacttttcagggatttttgtggtaatcaaaatctcgtaaaagatatggaaaaa
tggcttggcgtatgggataaaaaaggtttcaaatttaagaacaaagaatggatggctgca
ttgttaattgctggttctcccggaatcggaaagacatcatctgttcatcttgttgcaaat
actcaagggtacgatgtgattgagcttaatgctagtgacactcgaagcaaaaaacaattg
gatactgttatcaaagtagcaacaaaaaatacgtctattactggttttttccaaccattc
aatgataaatcttcaagtaaggagcatgcaaatgaggcacaaaaaaagaaaacacttatc
ttaatggatgaaatcgatggtatgtctgctggtgacaagggtggtatcgctgaactaatt
caattaatcaagaaaacaaaagtacccataatttgcatctgcaatgacattaatgctcaa
aaactcaaatcattaaggccttattgtcatgagttgaagttcagcaaacctcgggttgaa
caagtcagatcaagaattatgacaattgcaacgagggagaatttacagattcaatcaacg
gacgtagacgaactcattagaggagctaattccgatattcgtcaaattttaaacttgcta
tccacatggaagattaatcatgatagtattaattatgatgaaataaagggtttaaacaaa
aataatgagaaacatcttaaaaaaaatatctttgaaatagctaaagattttttgggcaat
gatatctggaaatctcgtaagaatacttttaatgataaaatgaaactttatttccaagaa
cacgatctagctcctttaatgatttttgaaaattatataaaaatgaaacctcacactatt
cctaagtttgttaaagaatatgataatggagatataaaaccagatactttagaaaaactt
gcatctctggaagcttttgtaaaagccgctgatgccatgtcttgcggagatatggttaat
aaaagaattcatggaccacaacaagaatggaatcttatgccaatccatggattcttttct
actattgcgcctgcatattacgttcatggttatagtaaaggaggtcaatttggtcaatat
aaatttccaagctggctaggacaaaattctaaagcaatcaagattcaccgtcaattgaaa
gaaattcaaagtcacatgcgaactaaaatttccgctgatagaagtgaagttcgcgaaagt
tacattcctactcttcgaaaagctctcattaaacctttggttgaccaaaaaactgaaggt
gtgaatgataccattaaaattatggatcaatacatgataaccaaagaacaattcgatgtt
atcatggaatttaaggatgatcaaacacactataaaccttctgaaatcgccagcggctta
aagtctacctttacaaagaaatataatgccagttcacaccctcttcccttcttaaatata
tcgagcgtgattacaactaagtccaggcctgttataactgctgatatggatgattttatt
gaagaggaagtagttcctgatgacgacgacgtaattgatgatgatgatgatcttgcaaag
gatcgcctcattatccaaccttccgtaggtcgtggaggtggtcgtggaggtggtcgaggt
ggtcgtggaggtaatcgtggaggtaatcgtggaggtaatcgtggagaacgtggtgcgagt
cgtagaagtcgtggccgcggcggccgcaaataa
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