KEGG   Rhizophagus irregularis: OCT59_028942
Entry
OCT59_028942      CDS       T10295                                 
Name
(RefSeq) uncharacterized protein
  KO
K03140  transcription initiation factor TFIID/TFIIF subunit
Organism
rie  Rhizophagus irregularis
Pathway
rie03022  Basal transcription factors
rie03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:rie00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    OCT59_028942
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    OCT59_028942
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rie03021]
    OCT59_028942
   03036 Chromosome and associated proteins [BR:rie03036]
    OCT59_028942
Transcription machinery [BR:rie03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     OCT59_028942
   Coactivators
    SWI/SNF complex
     OCT59_028942
Chromosome and associated proteins [BR:rie03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    NuA3 complex
     OCT59_028942
  Chromatin remodeling factors
   INO80 complex (yeast)
    OCT59_028942
   SWI/SNF complex
    OCT59_028942
SSDB
Motif
Pfam: YEATS pYEATS BET
Other DBs
NCBI-GeneID: 36878190
NCBI-ProteinID: XP_025169041
LinkDB
Position
8:4891134..4892811
AA seq 272 aa
MSDTNQSIVEKEIVVVTDQEISKHLKPTNGLPMRKWKVSIFAIDDMAEHCPLNYVERVEY
ILHPTFEPPERVVRKPPFTLSEKGWGEFDMKITLYFTDKTIIPFTFFHDLNFKKSHYEVP
HKLTFTDPKPTFQLLLFHEKSDESYSSMPKPNKKKTKSSLNASIKRQKNDTSGSPSYESG
NSSRSPCSTSESTNDKENYKVDYQKLARNLYALDEDDILEVIQIVNDHRSDDMYINEDTE
GEFHIDLYTLGDELLRTLWDFTESKLDQISSI
NT seq 819 nt   +upstreamnt  +downstreamnt
atgagcgacacaaaccagtcaatagttgaaaaagagattgtagttgtaaccgaccaggag
atatcaaagcatttgaagccaactaatggtcttccaatgcgtaagtggaaggtttcgatc
tttgcaattgacgatatggcagaacattgtcctctaaattacgttgaaagagttgaatat
atcttacatccaacatttgaacctcctgaaagagtggtgcggaaacctccatttacactt
tctgaaaaaggttggggcgagtttgatatgaagataacattatattttacagataaaacc
attattccttttactttttttcatgatcttaatttcaaaaaatctcattatgaagttcct
cacaaactaacttttacggatccaaaaccaacatttcagttgttgctttttcacgaaaaa
tctgatgaatcgtattcgtctatgcccaagcctaataaaaaaaagacaaaatcatcactt
aatgcttccattaaacgacaaaaaaatgatacatctggatcgccaagttatgaatctggt
aattcttcgcgatcaccgtgttctactagtgaatccacgaatgataaagagaattataag
gtagattatcaaaaattagcaagaaatctttatgcattggatgaggatgacatactcgaa
gtaatacaaattgtcaatgatcatcgttcagatgacatgtacataaatgaagatacagaa
ggagaatttcacatagatttatacaccctcggtgatgaattattgagaacactgtgggat
tttactgaatcaaaattagaccaaatttcatctatttaa

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