Rhizophagus irregularis: OCT59_029275
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Entry
OCT59_029275 CDS
T10295
Name
(RefSeq) Small subunit processome complex component
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
rie Rhizophagus irregularis
Pathway
rie03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OCT59_029275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rie03009
]
OCT59_029275
Ribosome biogenesis [BR:
rie03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
OCT59_029275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
Methyltransf_31
Methyltr_RsmB-F
DREV
Motif
Other DBs
NCBI-GeneID:
36873872
NCBI-ProteinID:
XP_025173510
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All DBs
Position
9:complement(1131648..1133111)
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AA seq
315 aa
AA seq
DB search
MAFTNRGRGGGNRGGRPFSRGGRGGGRGGGANFGTRGGSVQKRGFRGGGRGGGGGGGGGG
GGGGGRGRGGKGGRGGSRGGSRVIIEPHRHKGIFVARGKEDLLVTKNLVSGESVYGEKRI
SVEGPDGVKIEYRVWNPFRSKLAAGILGGVEDIFIAPDKKVLYLGAASGTTVSHVADIVG
PEGIVYAVEFSHRSGRDLINVAKKRTNVIPIIEDARHPHKYRMLVGMVDVIFADVAQPDQ
ARIITLNAHHYLKNNGYIVISIKANCIDSTAKAESVFASEVSKLKLQRIKPIEQITLEPY
ERDHALVIGKYIRSK
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcttttacaaatagaggacgaggcggtggtaatcgcggtggtcgtccgtttagtaga
ggcggtagaggcggtggacgcggtggtggtgcaaattttggtactcgcggtggaagtgtt
caaaaacgcggtttccgtggcggtggccgtggcggcggcggcggtggtggtggtggtggt
ggaggaggaggaggaagaggtcgtggtggaaaaggtggtaggggaggatctagaggagga
tcaagagttataatcgaaccacacagacataaaggtattttcgttgctcgtggtaaagaa
gatcttcttgtcacaaaaaatcttgtaagtggggaatctgtttatggagaaaaaagaatt
tcagtagaaggaccagatggtgtcaaaatcgaatatcgagtttggaatccattcagatca
aagttagctgccggtattcttggtggtgttgaagatatttttattgctcctgataaaaaa
gttttgtaccttggtgcagcttcagggactacggtatctcatgtagctgatattgttggt
ccagaaggtatagtatatgctgttgagttttctcatcgatcaggacgtgatcttattaat
gtggcaaagaaacgtacaaatgttatacccattattgaagatgctcgacatccacacaaa
tacagaatgttagttggtatggtagatgttatctttgctgatgttgcacaacctgatcaa
gcacgtattataacattgaatgcacatcattatttaaagaataatggatatattgtcata
tctatcaaagcaaattgcattgattctacagcaaaagctgaatcagtatttgcaagtgaa
gtatcgaaattaaaattacagcgtataaaacctatagagcaaattactcttgaaccgtat
gagcgtgatcatgctcttgttattggaaaatatatacgttcaaaatag
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