Rhizophagus irregularis: OCT59_029494
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Entry
OCT59_029494 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rie04121
]
OCT59_029494
Ubiquitin system [BR:
rie04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
OCT59_029494
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
LRR_NXF1-5
LRR_At1g61320_AtMIF1
LRR_8
LRR_Zer-1
LRR_FBXL18
Arc_capsid_dom
E2-Crich
Motif
Other DBs
NCBI-GeneID:
36881228
NCBI-ProteinID:
XP_065994728
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All DBs
Position
9:2040884..2041959
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AA seq
325 aa
AA seq
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MCEKHKPAYVSNVTHLEITYYHSLSDRKIKNIVDTFPNIIHLNFKESIGFGDRSLFIIAE
SYLNLRYLNLWDAEAITDKGLCAIVRSCRNLEHLNISYCRNITNESLFVIADNCHDLQEF
HFAEARRITDKSICCILNSCPNLRKFDIAYSKGKIKNASTLMQRCLNIEYLDFAGVMAFY
DDALIVAIIRASPNLRHLEIGGNDIDEIGYGALAHTCQKLEYFDLSGCTFISELSICNVI
RSCPKIQHLSLGCCNITSTTIKEIARSRPNLKFLDLEGSETESEDEVAYNNDVPPPIITG
TAETPNDFITAFNDYLRQVGGTLPI
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgaaaagcataagccagcttatgtctcgaatgtaacccatctagaaattacttat
taccattcgctttcggatagaaaaataaaaaatattgtggatacatttccgaatataatt
catttaaatttcaaagaaagtataggttttggtgatagatcactatttataatagcggaa
tcatatcttaatttaagatatctcaatttgtgggatgctgaagcgataaccgataaaggc
ttatgtgcgatcgtacgatcatgccgtaacttagaacatctaaatatttcttactgcagg
aatattaccaatgaatctttgtttgtaattgcagataattgtcatgatttacaagagttc
cattttgccgaagcacgtcggatcacagataaatctatatgttgcatcttaaactcatgc
ccaaatttacgtaaatttgatattgcatatagcaaggggaaaattaaaaatgctagtact
ttaatgcagagatgtctcaatatagagtatcttgactttgctggtgttatggctttctat
gatgatgcattaattgtagctatcattagagcatctccgaatttaagacacttagagatt
ggtggtaatgatattgatgagattggctacggtgcgctagcccatacttgtcaaaaatta
gaatatttcgatttaagtggttgtacatttattagtgaattatcaatctgcaatgttatt
cgctcctgcccgaagattcagcatctcagccttggatgttgcaatattaccagtaccact
atcaaagaaattgctcgttcacgtcccaatttaaaatttcttgatttggagggctccgaa
accgaatcagaggatgaagttgcctataataatgatgtacctcctccgataattacgggt
acggctgaaactccgaatgattttattactgcatttaatgattatcttagacaggttggt
ggtactctgccgatctaa
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