KEGG   Rhizophagus irregularis: OCT59_029519
Entry
OCT59_029519      CDS       T10295                                 
Name
(RefSeq) uncharacterized protein
  KO
K10752  histone-binding protein RBBP4
Organism
rie  Rhizophagus irregularis
Pathway
rie03082  ATP-dependent chromatin remodeling
rie03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:rie00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    OCT59_029519
   03083 Polycomb repressive complex
    OCT59_029519
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rie03036]
    OCT59_029519
Chromosome and associated proteins [BR:rie03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     OCT59_029519
  Histone modification proteins
   HAT complexes
    HATB complex
     OCT59_029519
   HDAC complexes
    Sin3A-HDAC complex
     OCT59_029519
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     OCT59_029519
    PRC2.2
     OCT59_029519
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     OCT59_029519
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    OCT59_029519
  Chromatin remodeling factors
   NuRD complex
    OCT59_029519
   NuRF complex
    OCT59_029519
   NuRF complex (fruit fly)
    OCT59_029519
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WD40_WDHD1_1st WDR55 Beta-prop_EML EIF3I Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd eIF2A Beta-prop_WDR19_1st Beta-prop_RIG_1st Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_DCAF4 MIOS_WD40 Beta-prop_SPT8 WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 36868882
NCBI-ProteinID: XP_065994742
LinkDB
Position
9:2108672..2110799
AA seq 439 aa
MMTTSNSDSPSSPNNEESTEETKQERAAIEEKIVNEEYKIWKKNSPFLYDLVITHALEWP
TLTCQWFQDIEKPEGKDYTIQRLLIGTHTSDNDQNYVEIANVQLPKSDSDIDPRKYEEEK
AEAGAHGESRITVVQRINHDGEVNRARYMPQDQNIIATKTVTGDVYIFDLTKHPSRPLAE
GVCNPELKLRGHTKEGYGLSWSPFDKGHILDASEDTTICHWNINGNTRETRTMEPFRVYR
GHEAIVEDVAWHTKDPHIFGSVGDDQKLLIWDVRPDRADKPVHSIIAHQSEVNSLAFNPH
NDFILATGAGDKTLSLWDLRNLKIKLHTLEQHTGEIVQVEWSPHDETILASAAGDRRVNI
WDLSRIGSEQTAEDAEDGPPELLFMHGGHTNKISDFSWNPHLPWVVASAAEDNIIQVWQP
AANIYTIDEREIPADELED
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgatgaccacatctaatagtgattcgccttcctccccaaataatgaagaatccactgag
gaaacgaaacaagaacgtgcggctatagaagaaaagatagttaacgaggaatataaaata
tggaagaaaaactcgccatttctttatgatttggttattactcacgcgcttgaatggcct
acactaacgtgtcagtggtttcaagatatagaaaaacctgaaggaaaagattatacaatt
caacgcttattaattggcactcatacatcagataatgatcaaaattatgttgaaatcgct
aacgtacaacttccaaagagtgattccgatattgatcctcgaaaatatgaagaagaaaaa
gcagaagcaggtgcacatggtgaaagtcgaataacagttgttcagaggataaatcatgac
ggcgaagttaacagagcgcgatacatgcctcaagatcaaaatataattgcaacaaagact
gtaactggagatgtatatatatttgatcttacaaagcatccatctaggcctcttgcagaa
ggagtttgtaaccctgaactaaaattgcgaggacatacaaaagaaggatatgggttatct
tggagtccatttgataaaggtcatattttagatgcttcagaggatactactatttgtcat
tggaatattaatggaaatacaagagaaacaagaacaatggagccatttagagtttatcga
ggacatgaagcaatcgtcgaggatgttgcgtggcatacgaaagacccacatatttttggt
tctgtaggggacgaccaaaaactacttatttgggatgtgcgtccagatagagccgataaa
ccagtacattcaattatcgctcaccaaagtgaagttaatagtttagcattcaatccgcat
aatgatttcattttggcaactggtgcaggtgataagaccttaagtttatgggatctacgt
aatcttaaaattaagttacatacacttgaacagcataccggtgagattgttcaagttgaa
tggtcaccgcatgacgagacaattctcgcatctgctgcaggtgatcgtagagttaatata
tgggatttaagtagaatcggttcagaacaaacggctgaagatgctgaagatggtccgcca
gaattattgtttatgcacggtggacacactaataagatttcggattttagttggaatcct
catcttccttgggttgttgccagcgctgcagaagataatattatccaagtgtggcaaccg
gctgcgaatatctatactattgatgaaagggaaattccagctgatgaattagaagattaa

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