Rhizophagus irregularis: OCT59_029588
Help
Entry
OCT59_029588 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
rie Rhizophagus irregularis
Pathway
rie03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
OCT59_029588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rie03400
]
OCT59_029588
DNA repair and recombination proteins [BR:
rie03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
OCT59_029588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_PK_bind
Ku
Ku_N
VWA_4
Motif
Other DBs
NCBI-GeneID:
36865953
NCBI-ProteinID:
XP_025182335
LinkDB
All DBs
Position
9:2481252..2484608
Genome browser
AA seq
759 aa
AA seq
DB search
MADKKCTIYIVDVGPTMWQVKRDEGGIALDLARKALLAMLEAKVFAGLKSDVTGLLVFGT
DETDNQLNDQTPGEYENITTLYPIEQPQLPILRTVNNNMPHGNVQADAFDAIIVALNMME
EYCKKLKFTKKIYLFTDGESPINQYDFDRVSSQILDQNIELNVLGVDFDDPDIGLRQENK
SENKKRNEQFLRKLADTCKGTIFSMEDVLRQLSKPYIRPVKPMPVYRGSLTLGDPQTYGS
ASLLIEVELIARTMKAKPKSFKKYSALAEAANNIENKTYEVSHSRTYSITVDENVNEKVD
VPQDELDKAYALGKTFIPLPKQDENIFSFETTPCLSIISFIRTEEFRRELVLSNVFTVVP
KKDEPVAAQRLSSFIHVLYEKDSFAIVRYVKKPLESPKLGVLVPYIKPPKECLYFARIPF
KEDYRRFTFPSLDRIVTKTGKELDVHEYLPTDEMLDKMGNFIENLDLMNAATDGKGNSRE
YLKVKECYNPVNVMIKKAVSHKALYPEESLPQPDPALKAQTRMLPSLVEKNKELVEEMRA
LFKIKEVKGKGKTTKRRFADANVVIEQNLSLDQLLNNDNTLENGKKPKSENGDREDSLML
DKKDSVREVGLTDPLGSFKEMIANREEDLVTQAVEQMCQVIEHFVKSSFGASLYEKALEC
LKLLRETCAKENESEMFNKFLKDLKTLVFTCNPSKTDFWELLGSNKLTLISNKEADDSSI
TENEAEEFLKTKFERKSIIETADEEQMPTDELLNLMDDD
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaaaaatgtacaatttatattgttgatgtaggacctacaatgtggcaagtc
aagcgggacgagggtggcatcgcgttagacttggctcgaaaagcccttttggccatgctt
gaagcaaaggtttttgcgggtcttaaatccgatgtgactgggttgcttgtatttggaaca
gatgaaacagacaatcaactgaatgatcagacgccaggtgaatatgagaatataactaca
ctatatccaatagaacaaccacaattaccgattcttcgaacagtaaataacaatatgcct
catggaaatgtacaagcagatgcttttgatgcaattatcgttgcattgaatatgatggaa
gaatattgtaaaaaattaaagttcacaaaaaagatatatcttttcactgatggagagtct
cctataaatcaatatgattttgatcgtgtatcatcgcaaattttagatcaaaatatagaa
ttaaatgtattaggtgtagattttgatgatcctgatattggactaagacaagaaaacaaa
tctgaaaacaagaaaagaaatgagcaattcttacgaaagcttgccgatacatgcaagggt
acaatcttttctatggaagatgttttgagacaactctcaaaaccatatataagacctgtt
aagcctatgcctgtttaccgaggatccttaactcttggcgatcctcaaacgtacggttca
gcttcacttttgatcgaagttgagttaattgctcgtacaatgaaggcaaaaccaaaaagt
ttcaaaaagtattcagctcttgcagaagcagcgaacaatatagagaacaaaacatatgaa
gtgagccattctaggacttattccataactgtggatgagaatgttaatgaaaaggttgac
gtaccacaagatgaattggacaaagcttatgcgttgggcaagacttttataccattgccc
aagcaagatgagaacattttttcatttgaaaccaccccctgtttgtcaataatttcgttt
attaggacggaagagttcagacgagaattagtcttgtctaatgtatttacagttgtaccc
aaaaaagatgagccggttgctgctcagcgtctttcatctttcatacatgtactatacgaa
aaggattcatttgccatagttcgatatgtaaagaaaccccttgaatcaccaaaattaggt
gtattagtcccttatattaagcctccaaaagaatgtttatattttgcccgtattcccttt
aaagaagattatcgaagatttacttttccatctttggatcgtatcgtgactaaaactgga
aaagaattggatgttcacgaatatttaccaaccgacgaaatgttagataagatggggaat
tttattgaaaatttggatttgatgaatgcagcaactgatggtaaaggaaattctagagaa
tatttgaaagtgaaagaatgttataatcccgttaacgttatgataaaaaaggcagtgagt
cataaagcactatatccagaagaatcattgccacagcctgacccagctttgaaagctcaa
acaagaatgttgccatctttggtggaaaaaaataaggaactggttgaagaaatgcgagca
ttatttaagataaaagaagttaaaggaaaaggcaaaactacaaaacgtagatttgctgac
gctaatgtagttattgaacaaaatctgagtcttgatcaacttttaaataatgataataca
cttgaaaatgggaaaaaaccaaagtccgagaatggagatagggaagattctttaatgtta
gacaaaaaggattctgtacgtgaagtaggtttgacagatcctcttggcagttttaaagaa
atgattgctaatcgcgaagaagatttggttacccaggctgtggaacaaatgtgtcaagta
attgaacactttgtgaaatcttcgtttggggcatcactgtatgaaaaagcactggaatgt
ttaaaattattacgagagacttgtgccaaggagaatgaatccgaaatgtttaataaattt
cttaaagatttgaaaactcttgtttttacttgtaatccttcaaaaacagatttttgggaa
ttgcttggaagcaataaattaaccttaattagtaacaaagaggctgatgatagttcaata
actgagaatgaggcagaagagtttttgaaaacgaaatttgagaggaaatcaattattgaa
acagcggatgaagaacaaatgccaacggatgaattattaaatttaatggacgacgattaa
DBGET
integrated database retrieval system