KEGG   Rhizophagus irregularis: OCT59_029751
Entry
OCT59_029751      CDS       T10295                                 
Name
(RefSeq) uncharacterized protein
  KO
K10740  replication factor A3
Organism
rie  Rhizophagus irregularis
Pathway
rie03030  DNA replication
rie03420  Nucleotide excision repair
rie03430  Mismatch repair
rie03440  Homologous recombination
rie03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:rie00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    OCT59_029751
   03420 Nucleotide excision repair
    OCT59_029751
   03430 Mismatch repair
    OCT59_029751
   03440 Homologous recombination
    OCT59_029751
   03460 Fanconi anemia pathway
    OCT59_029751
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rie03032]
    OCT59_029751
   03400 DNA repair and recombination proteins [BR:rie03400]
    OCT59_029751
DNA replication proteins [BR:rie03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    OCT59_029751
DNA repair and recombination proteins [BR:rie03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     OCT59_029751
   MMR (mismatch excision repair)
     OCT59_029751
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     OCT59_029751
SSDB
Motif
Pfam: Rep_fac-A_3 DUF5678 SAVED
Other DBs
NCBI-GeneID: 36868462
NCBI-ProteinID: XP_025176880
LinkDB
Position
9:complement(3232345..3233288)
AA seq 109 aa
MNNKTEPSSPRINFSLLSKYRGQTVRCIGRVLNTTKTDATLETCDRGQVTVHLEPDTTLM
PFSNVEVVGRVTTELGIKVYVTYDINDDFDFDFYNSLVKLSQNYPNLFS
NT seq 330 nt   +upstreamnt  +downstreamnt
atgaataataaaacggaaccttcttcaccaagaatcaacttttcacttctttcaaagtat
cgtggtcaaactgttcgttgtatcgggcgtgttttaaatacaacaaaaaccgatgcgaca
ttggaaacgtgtgaccggggacaagttacagttcatttggaaccggatactacattaatg
ccattttcaaacgttgaagttgttggacgcgttaccaccgaattaggtattaaagtgtat
gttacatatgacataaatgatgactttgacttcgacttttataattctttggtgaagttg
tcgcaaaattatccaaatctattttcctga

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