Rhizophagus irregularis: OCT59_029954
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Entry
OCT59_029954 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
rie Rhizophagus irregularis
Pathway
rie04145
Phagosome
rie04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
OCT59_029954
09142 Cell motility
04814 Motor proteins
OCT59_029954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rie03036
]
OCT59_029954
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rie04812
]
OCT59_029954
Chromosome and associated proteins [BR:
rie03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
OCT59_029954
Cytoskeleton proteins [BR:
rie04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
OCT59_029954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Dynein_IC2
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
WDR54
Microp_apicomplexa_15
Mis12
Motif
Other DBs
NCBI-GeneID:
36871276
NCBI-ProteinID:
XP_025170062
LinkDB
All DBs
Position
9:4056041..4059164
Genome browser
AA seq
639 aa
AA seq
DB search
MEMERRKEELEKKRQKLAELRRAREERKQVFTTATQKQEEKSVERSRKEQIDDLVKSLLK
DKATGDHPGTPTSSKSDDVEPEKGITSHHARLSSISTGYSPGTSVPQSPSILAPSRYIPD
FSSFEAVILDIAPKELILYSKEVQTTERSFGPPPPNEDEIRAKFLKEQEEKEKARQAALE
EERSRLEDEKKKMQQLKDISEDVRKKIISSNEFVEFIDHSTKIVERVLNENYDYMKDYSI
IKDNENDDQSGSRVKYVNSFFDDRWTKNRSVTDVNWSRKNPEICVASYNKNPMAMNEPDG
VAVVWSLKLLERPEYVFHSQSDVLTTMFSEFHPTLVIGGTYSGQIVLWDMRSKSLPVLKT
PLSASGHTHPVYSMQMVGTQNAHNLITASTDGLICSWQLDMLAQPQETLELVHAEHSKTD
EVSVTALGFPENETAAFWVGTEEGIAYQANRYGRAGGKAGINPYDVYKGHWGPITGLHFH
PMTGQHNFSDLFLTSSVDWTCKLWRAKSISKPSTSPQTITPLYSFEGADDYVYDVKWSPT
HPALFASVDGTGKFSLWNLNVDTEVPIVSTQVGSQAKALNKINWDKEGRKTAIGSSDGRV
HIYDIGELANPRDDEWEILHKTISEMTTENHNGRYVVAK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggaacgtagaaaagaagagttagaaaagaaaaggcaaaaacttgccgaactt
cgtcgtgcaagagaagagaggaaacaagtgtttaccactgcgactcagaaacaagaggaa
aaatctgtggaaaggagtcgcaaggaacagatcgatgatcttgtcaaatccctgttaaaa
gacaaagctactggagaccatcctggaacaccaacatcatcaaaatctgacgacgtagag
cccgaaaagggaataacctcacatcatgcacgtctcagttctatttccacaggttattcg
cctggaacttctgttcctcaaagtccgagtatattggcaccttcccgttatattccagat
ttctcttctttcgaagcagtaatattagatattgctccaaaggaactcattctttacagt
aaagaagttcaaaccactgaaagatcctttggaccaccaccacctaacgaagacgaaatc
cgagctaaatttttaaaagaacaagaggaaaaagaaaaagcacgtcaagctgctctggaa
gaagaaagatcgagattggaagatgaaaagaagaaaatgcaacaacttaaagatatttca
gaagatgttagaaaaaagattattagttcaaatgaatttgttgaatttattgatcattca
actaaaattgttgagagagtgcttaatgaaaattatgattatatgaaagattattcaatt
attaaggacaatgagaatgatgaccagtcaggctccagggttaaatatgtaaactcattc
tttgacgaccgatggaccaaaaatcgttcagtcactgatgtaaattggtcgcgcaaaaat
cctgaaatttgtgttgcttcatataataaaaaccctatggcaatgaatgaaccagacggt
gtcgctgtagtatggagtttaaaattattagaacgacccgaatatgttttccattcgcag
tcggatgttcttactacaatgttctctgagtttcacccaactcttgtaataggaggaaca
tattcaggtcaaatagttctttgggacatgagatcaaaatctttacctgttctcaaaaca
cctctttcagcttctgggcatactcatcctgtatactcaatgcaaatggtggggacacaa
aatgctcataatctcatcactgcaagtacggatggattaatatgttcttggcaattggat
atgttagctcaaccacaggaaaccctagaactagttcatgccgaacatagcaagacagac
gaagtttcggttacagctcttggttttccagaaaatgaaactgcagctttctgggttggt
acggaagagggtattgcttatcaagctaatagatatggccgtgctggcggcaaagccggt
attaatccatatgatgtatataaaggacattggggacctattacaggtcttcattttcat
cctatgactggtcaacataacttttcagatttatttttgacttcttctgtggactggaca
tgtaaattgtggagagctaaatctatttcaaaaccatcgacatcaccacagacaattact
ccattatattcatttgaaggcgctgatgattatgtttatgatgttaaatggtcccccaca
catccagctctgtttgcttctgtagacggtacaggaaaattctctttgtggaatttgaat
gttgacacagaggtgccaattgtgagtactcaagttggaagtcaagctaaagctttgaat
aaaattaattgggacaaggaagggcgaaagacagcaatcggttcttcggatggtcgagtc
catatttatgatattggagagttggcaaatccacgtgatgatgaatgggaaatcttgcat
aaaacgatttctgaaatgactactgagaatcataatggaagatacgttgttgccaagtaa
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