Rhizophagus irregularis: OCT59_030133
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Entry
OCT59_030133 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K03679
exosome complex component RRP4
Organism
rie Rhizophagus irregularis
Pathway
rie03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
rie03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
OCT59_030133
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
OCT59_030133
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
36868832
NCBI-ProteinID:
XP_065995098
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Position
9:4934082..4935623
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AA seq
316 aa
AA seq
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MTFQFLSPKPSSYTNKVDADGDIDMLLKTERENFETKVVTPGETITHATQYMGGHGTYIS
PETNQRLSSVAGVVDRVNKLISIRPLHTRYTGEIGDLVIGRITEVSQKRWKVDINSRQDA
VLLLSSINLPGGVQRRKTEADELQMRKFFSEGDLLVAEVRETFQDGSFSLHIRSLKYGKL
RNGSFVIVPPALVQRCKTHFHTLPCGVNLTLGLNGYIWVSKHTTQTVEELAIYSNENEEI
DQENREAIARVCNSISALSRHFMCINDKMIMLAYEASLNFPVKDLLKLDVMEVITSECFL
VIRSMSKVIRAMLKYN
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgacttttcaattcctctccccaaagccatcatcgtatacaaataaagttgatgcggat
ggagatattgatatgcttcttaaaacagaaagagaaaatttcgagacgaaagttgtgacg
cctggcgaaaccataactcatgctacacaatatatgggaggtcatggaacttatatttca
cctgagacaaatcaacgtttgtcatcggtagccggcgtggttgatcgcgtcaacaaacta
atttctatacgccccttacacacgaggtatacgggtgaaattggagatttggtaataggt
agaattacagaagtttcacaaaaaagatggaaagttgatataaattcaagacaagatgca
gtattattgttgtcgtccattaaccttcctggtggtgtacaaagacgtaaaactgaggca
gatgaacttcaaatgagaaagtttttttctgagggagatttattagtggctgaagtacga
gaaacttttcaggatggttctttttcattacacataagaagtcttaaatatggcaagtta
cgtaatggttcttttgttatagttccaccagcacttgttcaacgatgtaaaacacatttt
catacgttaccgtgtggagttaatttgactttaggtttgaatggttatatttgggtgagc
aagcatacaacacaaacagttgaagaattggccatttattctaatgaaaatgaggaaatt
gatcaagaaaatcgtgaagcaattgcgcgagtttgtaatagcatcagtgcattgagccgc
catttcatgtgcataaatgacaaaatgataatgttagcgtatgaagcttctttgaatttt
ccggttaaagatttattaaaattagatgtgatggaagtcataacaagtgaatgtttctta
gtaatacgatcaatgagcaaggttattagagctatgttaaaatacaactag
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