KEGG   Rhizophagus irregularis: OCT59_030159
Entry
OCT59_030159      CDS       T10295                                 
Name
(RefSeq) uncharacterized protein
  KO
K10752  histone-binding protein RBBP4
Organism
rie  Rhizophagus irregularis
Pathway
rie03082  ATP-dependent chromatin remodeling
rie03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:rie00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    OCT59_030159
   03083 Polycomb repressive complex
    OCT59_030159
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rie03036]
    OCT59_030159
Chromosome and associated proteins [BR:rie03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     OCT59_030159
  Histone modification proteins
   HAT complexes
    HATB complex
     OCT59_030159
   HDAC complexes
    Sin3A-HDAC complex
     OCT59_030159
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     OCT59_030159
    PRC2.2
     OCT59_030159
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     OCT59_030159
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    OCT59_030159
  Chromatin remodeling factors
   NuRD complex
    OCT59_030159
   NuRF complex
    OCT59_030159
   NuRF complex (fruit fly)
    OCT59_030159
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_Prp19 Beta-prop_EIPR1 WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_NWD2_C WD_LRWD1 Beta-prop_WDR19_1st Lgl_C Hira WDR90_beta-prop_4th Beta-prop_NUP159_NUP214 Beta-prop_VPS8 IL3Ra_N
Other DBs
NCBI-GeneID: 36876789
NCBI-ProteinID: XP_065995121
LinkDB
Position
9:5066265..5068783
AA seq 440 aa
MMNNNLPIEKIREYTCLYKSSTWESRIVLRYDVVYSQFTEWNNKPCSFYTIEWGDIPRKR
IRQEENGSKYMLYSATNMALTMTNEAYLSILECQLYPEGSPLNYGLVNSIQSAKRTSVKH
CDNINFYQRILHHEIDSLQQARLLTSQKVVTSGKQFIYVWDLKNTLVRSENERPAAQIKL
ALDDSSSSIIGPALCVAKNKQIVVNGAENGYLALWNLADYQTGSNQRALMPRNKNKITED
PTNKILSCDCKEDSTNISCTSSRGNVIIWDYRTNKIAQNVEKAHKAAAMSCHMNPHKEHY
LLTSSADGIIEWWDTRKMKNVFKNSEPSPLSTFKQHQSSVNKVSWSPHNNELFASCSDDC
SVIIWNTEGINKNNNDKQEGAKFKHTGHRQKVLDIAWHPDPEFSKTIASVSPFVSHHGVS
GLLQDNLDIFKVSTNYDRLY
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgatgaataataatttgcctatcgagaaaatcagagaatatacgtgtttatataagtct
tcaacgtgggaatcaagaattgtacttcgatatgatgtcgtctattctcagtttactgaa
tggaataataaaccatgctcattttatacaattgaatggggagatataccaagaaaaaga
ataaggcaggaagaaaatgggtcaaaatacatgctttacagtgcaaccaatatggctcta
acgatgactaatgaagcatatttaagcatattagaatgtcagttgtatccagaaggtagc
ccattgaattatggtttagtaaattcaattcagtcagctaaaaggacaagcgtaaaacat
tgtgataatataaacttctatcaacgaattttacatcatgaaattgattcacttcaacaa
gcaagacttttaacttcgcagaaggttgttacaagcggaaagcaatttatttatgtatgg
gatctgaaaaacacgttagttcgttctgaaaacgaaagacctgctgcacaaattaaattg
gctctcgacgatagtagctcatcaataatcgggccagcattatgtgtggccaaaaacaaa
caaatagtagttaatggtgctgaaaatggatatttagccctatggaatttggccgattat
caaacaggatcaaatcaaagagcacttatgcccagaaataaaaataagattactgaagac
cctacaaataaaatcctatcatgtgattgtaaggaagatagtacaaatatatcttgtact
tcaagtcgaggaaatgtgattatttgggattatcgtacgaacaaaatcgcccaaaatgtg
gaaaaagcacataaggcagcggctatgagttgtcatatgaatccacacaaagaacattat
ctattaacatctagtgcagatggtattattgaatggtgggacactcgaaagatgaagaac
gtgttcaaaaattctgaaccatctccgttatccacttttaagcaacaccaaagttccgta
aataaagtatcttggtcgcctcataacaatgaattatttgccagttgttcggatgattgc
agtgttatcatttggaatacagaaggtataaataaaaataataacgataagcaggaaggc
gcgaaatttaagcatacgggtcacaggcaaaaagtattagatattgcatggcatcctgat
ccagagttcagcaaaacaatagcttccgtttccccctttgtttctcatcatggtgtttcc
ggattattacaagataatttagatatatttaaggtatcaacaaattacgatagactttac
tga

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