Rhizophagus irregularis: OCT59_030161
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Entry
OCT59_030161 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
rie Rhizophagus irregularis
Brite
Transcription machinery [BR:
rie03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
OCT59_030161
RSC complex
OCT59_030161
Chromosome and associated proteins [BR:
rie03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
OCT59_030161
SWI/SNF complex
OCT59_030161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
36868839
NCBI-ProteinID:
XP_065995123
LinkDB
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Position
9:5070262..5075892
Genome browser
AA seq
1423 aa
AA seq
DB search
MTQLQEKISNLSQTLVQLCVGELSKETLDKILETLKTMKVLGATEETNSSYANAKSYLRE
CELKAKAQSKLNEEQLSRISNQKAAYARLVSEQQIPLNMQLGMLSKEQAEKEKEDLLSYK
LARTVIFDDFTGEIPIPNIPTPENVEKMQYEAEESEHSLRARIQNRIRQLESLPSNLSND
PPALRSQVNVELRNKPGPKIKALIELKSLKLYKIQQKIRHDVLQYSQFRKPEPIVSMVNR
RRPVKQKIRTWTATQAAEKERVERSTRSQRLMRQDFLDNIIAHGDDMISRNKKKQNMRMK
LGRAILNYHVILQKEYQRKTDRYSKERLAALKNNDEEAYLKLIDEAKDTRITHLLRQTDV
YLESLAKAVIAQQNEFQQFSPMDSSLKPGSSIIRPNDTFITSANNNHNFLNNVAISNDSH
IQAVSGTIETAINDTSKSENKNEENTYITNEVDINDRSNDDLTGVVDLSKPSTPVEDEDN
IIQTTDGKKIDYYAVAHRIQEEVHQPIMLDGGTLKEYQLKGLQWMVSLYNNRLNGILADE
MGLGKTIQTISLITYLIEKKQQHGPFLIIVPLSTLTNWNLEFDKWAPSVKKCIYKGPPPE
RKEIQKRYLRHGNYHVCLTTYDFIIKDKTVLSKPKWLYVIIDEGHRMKNTNSKLSMVLCN
DYVFRYRLILTGTPLQNNLPELWSLLNFVLPKIFDSVKSFDEWFNTPFANTGGQDKIALN
EEESLLIIRRLHKVLRPFLLRRLKKDVESELPDKIETVIKVKMSALQVKLFNQMKKHGAL
FVNKGEKGKTGIKGLNNTIMQLRKICNHPFVFEEVEKDTNLHNDNNLLYRVSGKFEFLDR
VLPKFYQSKHRVLIFFQMTTIMTIMEDYLAWRGYHFLRLDGSTKADDRSAKLKEFNDPNS
PHFIFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTNEVRILRLICQ
KSIEETILARAQYKLDIDGKVIQAGKFDQKSTAEEREAFLRSLLETGDAEINDPEDEERE
VLEDDEINLLISRNEEELELFKKIDIARQKREEELWKESGGDGPLPARLIQENELPEVYK
KEYETRPGDSTEYGRGQRQRKEVYYTDGLTDEQFINIIDMDEEEFNRVIAEKQKLLLKNR
ENSRKRMFQQKGEDSQATAESVAETSSISSSVRTSKRVAKLKAENDADIDTDPMATPSMS
IKLSRRKGKGKMIEQLSPEENDQSQDTFSSSRPKRKIKRFKIFEDDDDMFNKSLFEESST
LISIKGKKRKHNTDDNKRRLKLTDFNDGKEKVMRMKPIFQECISHIENVKDENSRVRAEI
FFDLPSKKEYPEYYRIIKRPIAINTIRSRIEKEKYKTLGQFRDDVILMFRNAQIFNEDDS
EVFKDSQALEKEFDNRFRELTRETEELLNFDNVEPMEVDDFLV
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgacccaactacaagaaaaaatctctaatctttcgcaaactctcgtccaactttgtgtt
ggtgagttgtcaaaagaaacactagataaaatacttgagaccctaaaaactatgaaagtt
cttggggccactgaagaaacaaactcatcctatgctaacgcaaagagttacttgcgtgaa
tgtgaactaaaggctaaggcacaatcaaagttgaatgaagaacaattgtcaagaattagc
aaccaaaaagccgcttacgctcggctagtcagtgaacaacaaataccacttaatatgcaa
ttaggaatgctatctaaagaacaggctgagaaggaaaaagaagacctactttcatataaa
ctagctagaacagtaatctttgacgactttacaggagaaatccctatacctaacatacca
acacctgaaaatgttgagaagatgcaatacgaagctgaagaaagtgaacattctttacgt
gccagaatacaaaatcgtattaggcaacttgaaagcttaccatccaatttatcaaatgat
ccacctgcactcagaagtcaagtaaatgtagaattaagaaataagcctggcccaaaaatt
aaagcattaatagaacttaaaagtttaaaattatataagatacagcagaagattcgacat
gatgtattacaatattcacaatttaggaaaccagaacctatcgtgtctatggttaaccgt
aggcgaccagtaaagcaaaagatacgaacttggaccgccactcaggcagcggaaaaagag
agagttgagagatcgacacgcagccaaaggctaatgcgacaggattttctagataatatt
atagctcacggtgatgatatgataagccgcaataagaagaaacagaacatgagaatgaaa
ttaggtcgtgccattttgaattatcatgtgatccttcaaaaagagtatcaaagaaagaca
gatcgatactctaaggaacgattagcagcgttaaagaataatgacgaggaggcctactta
aaacttattgatgaggcaaaagacactcgtattactcatctattaaggcaaacggacgtt
tatctcgagtcattagcaaaggcagtaattgctcaacaaaacgaatttcaacaattttca
cctatggattcatctctgaaacctggtagtagtatcatacgaccaaatgatacatttatt
acatcggccaataataatcataacttcttgaataatgttgcgatatcaaatgatagtcat
attcaggcagtgagtgggactatcgaaacagcaattaatgatactagtaaaagtgagaat
aaaaatgaggaaaacacctatataacaaatgaagttgatattaacgatcgttccaatgac
gatctcacgggtgtagttgatctcagtaagccctcgactccagttgaagatgaagataat
attattcaaactacggatggaaagaagattgattattatgctgtcgcgcatcgtatacaa
gaagaagtacatcagcctatcatgttagatggtggtacattgaaggaatatcaactcaaa
ggtcttcaatggatggtttcattgtataataatcgtcttaacggaatccttgctgatgaa
atgggtcttggtaaaactattcagacgatatctttgataacttatctcatcgaaaagaaa
caacaacacggtccattcttgattattgttccattatcaactttaaccaattggaatttg
gagtttgataaatgggcaccttctgttaaaaaatgtatttataaaggcccacctcctgag
cgtaaagagattcagaagcgatatttaagacacggcaactaccatgtctgcctaacaact
tacgacttcatcattaaagacaagacggtcttgagcaagccaaaatggctttatgttatt
atcgacgaaggtcaccgtatgaagaacacaaattcaaagctatccatggttttgtgtaat
gattatgtctttcgatatcgattaatattaactggaacaccattgcagaataatctgcca
gaattgtggtctttattgaactttgttttaccaaaaatatttgattctgtgaagagcttt
gatgaatggtttaacactccgttcgcgaatacaggtggtcaagataagatcgcattgaac
gaagaagaatctttattgattatccgtcggttgcacaaggttttgagacctttcctgctt
cgaagattaaaaaaagatgtggaatcagaacttcctgataaaatcgagactgttataaaa
gtcaagatgtcagctttacaagtgaaacttttcaatcaaatgaaaaaacatggagcctta
tttgttaataaaggcgagaaaggaaaaactggtattaaaggactcaataataccattatg
caactccgtaagatttgcaatcatccattcgtatttgaggaggttgaaaaggacacgaat
cttcataatgataataatctcctttatcgtgtttccggtaaattcgagtttttggaccgg
gttttacccaaattttatcagagcaagcatagagtcttaattttcttccaaatgacaact
attatgactataatggaagattatcttgcttggcgtggatatcattttctccgactggac
ggcagtacaaaagcagatgatcggtcagctaaacttaaagaattcaacgacccaaattca
cctcattttatctttctactcagtacaagagctggtggattaggtttgaatttacagacc
gcagatacagttattatatttgactctgactggaatcctcatcaggatctccaagctcaa
gatcgtgcccacagaatcggacaaaccaacgaagtcagaattttacgattaatttgtcaa
aaatcgatcgaagagactattctcgcaagagctcagtataaacttgatatcgatggtaaa
gtcatccaagctggtaaattcgatcagaaaagtaccgctgaagagcgtgaagcttttcta
cgttctcttttggaaaccggtgacgcagaaattaatgatcctgaagacgaggaacgagag
gttttagaagatgatgagatcaatttactaatttctcggaacgaagaggagctcgagcta
tttaaaaaaattgatattgccaggcagaaaagagaagaagagctttggaaagaatctggt
ggagatggtcctctacctgcaagattaattcaagaaaatgagttgcctgaggtatataag
aaagaatatgagacacgtcctggtgattctactgaatatggtcgaggacaaagacaaagg
aaagaagtatattatactgacggtttaacagatgagcaatttattaatattatagatatg
gatgaagaagagtttaacagagttattgctgaaaagcaaaaactactccttaagaatcga
gaaaattcaaggaaacgtatgtttcaacagaaaggcgaagattcccaagcaacagcagaa
tctgttgcggagacttcctcaatttcatcatccgtacgtacttccaagagggttgcaaaa
cttaaggcagaaaatgatgctgatattgacacagaccctatggcaacaccttcaatgtct
attaaactttctcgcaggaaaggaaaaggtaaaatgattgaacaactaagccctgaagaa
aatgatcaatcccaagatacattttcttcttccagacctaaaagaaagattaaaaggttt
aaaatattcgaggatgatgacgacatgtttaataaaagcctatttgaggagtcatcaaca
cttatatctatcaaaggaaaaaaacgaaagcataatacggatgacaataaacgtcgatta
aagttaactgattttaatgatggcaaggagaaagttatgagaatgaagcctatttttcag
gaatgtatttctcacattgaaaatgtgaaggatgaaaactcaagagtacgggcggaaatc
ttttttgatcttccaagtaaaaaggaatacccagaatattatagaataattaagaggcca
attgctattaacaccatcagatctcggattgagaaagaaaaatataaaacgcttggccag
ttccgagatgatgtaatcttgatgttccgaaatgcacaaatcttcaacgaagacgattct
gaggtttttaaagactcccaagcgttagaaaaggagtttgacaatagattccgagagctt
acaagagaaaccgaagaattattaaatttcgacaatgtcgagccgatggaagttgacgat
ttccttgtataa
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