Rhizobium indigoferae: U5G49_000001
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Entry
U5G49_000001 CDS
T09660
Symbol
dnaA
Name
(GenBank) chromosomal replication initiator protein DnaA
KO
K02313
chromosomal replication initiator protein
Organism
rif
Rhizobium indigoferae
Pathway
rif02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
U5G49_000001 (dnaA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rif03032
]
U5G49_000001 (dnaA)
03036 Chromosome and associated proteins [BR:
rif03036
]
U5G49_000001 (dnaA)
DNA replication proteins [BR:
rif03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
U5G49_000001 (dnaA)
Chromosome and associated proteins [BR:
rif03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
U5G49_000001 (dnaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DnaA
Bac_DnaA_C
DnaA_N
IstB_IS21
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
WQN34982
LinkDB
All DBs
Position
join(4863409..4863510,1..1449)
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AA seq
516 aa
AA seq
DB search
MQMNTMTTSGLDNADAAPQAFGSIRLEAAEVKADMKQNVLFERVSARLKAQVGQDVYASW
FARLKLHSVSKSVVRLSVPTTFLKSWINNRYLDLITGLFQAEDPEILKIEVLVRTATRHG
MKPLDEAAVPEPAAPTQMRRPTSAQPAGQAAQQAVSAVAAVRPASFGSPLFGSPLDSRFT
FDTFVEGSSNRVALAAAKTIAEAGQGAVRFNPLFIHSTVGLGKTHLLQAVANAAVQNPRA
LRVVYLTAEYFMWRFATAIRDNDALTLKDSLRNIDLLIIDDMQFLQGKMIQHEFCHLLNM
LLDSAKQVVVAADRAPWELESLDPRVRSRLQGGVAIELDAPDYEMRLEILKRRLAVARLE
DPSLEIPAELLQHVARNVTASGRELEGAFNQLVFRRSFEPNLSIERVDELLAHLVGSGEP
RRVRIEDIQRIVARHYNVSRQELVSNRRTRVIVKPRQIAMYLSKTLTPRSFPEIGRRFGG
RDHTTVLHAVRKIEELISGDTKLSHEVELLKRLINE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgaatacgatgacgacgagcgggctcgacaatgcggatgcggcaccgcaggcg
ttcggctcaattcgcctggaagcggcggaagtaaaggcggatatgaagcagaacgtattg
tttgagcgcgtcagtgcgcgcttgaaggctcaggtcggtcaggatgtctacgccagctgg
ttcgcccggctgaagctgcattcggtatcgaagagcgtcgttcgcctttcggtccccacg
accttcctgaagtcgtggatcaacaatcgttatctcgatctcatcaccggtctgttccag
gccgaagatccggaaattctgaaaatcgaagtcctggtgcgtacggcgacgcgccatggc
atgaagccactcgacgaagcggcggtaccggaaccagccgcccccacgcagatgcgccgc
ccgacaagcgcccagccggccggtcaggccgcccagcaggcggtgtcggctgttgccgcc
gtaaggcctgcaagctttggctcgccgctcttcggttcgccgctcgatagccgctttacc
ttcgacaccttcgtcgaaggcagctcgaaccgggtcgcgcttgcggctgcaaagacgatc
gcggaagctggtcagggcgccgtgcgcttcaacccgctcttcatccattcgaccgtcggc
ctcggcaagacccacctgctgcaggcggtcgccaatgccgcggtgcagaacccgcgggcg
ctgcgcgtcgtctatctgacggccgaatatttcatgtggcgcttcgccaccgcaatccgc
gacaatgatgcgctgacgctgaaggattcgctgcgcaacatcgatctcctgattatcgac
gacatgcagttcctgcagggcaagatgatccagcatgaattctgccacctcctgaacatg
ctgctcgacagcgccaagcaggtcgtcgttgccgccgaccgtgcgccttgggagctggag
tcgctcgatccccgcgttcgctcgcgcctgcagggcggtgtcgcgatcgaactcgacgcg
ccggattacgagatgcgtctcgaaatcctcaagcgtcgccttgctgtagcccgcctcgaa
gatccgtcgctcgaaattcccgccgagctgctccagcacgttgctcgcaacgtcacggcc
agcggccgcgaacttgaaggcgccttcaaccagctggtcttccgccgctccttcgagcca
aacctgtcgatcgaacgcgtggacgaactgctcgcccatctggtcggctccggcgagcct
cgccgtgtgcgcatcgaggatatccagcgcatcgtcgcaagacactacaacgtctcgcgt
caggaactggtctcgaaccgccgcactcgcgtcatcgtcaagccgcgccagatcgccatg
tatctgtcgaagacactgacgccgcgctccttcccggagatcggccgccgtttcggcggg
cgcgatcacacgaccgtgctgcatgccgtgcgcaagatcgaggagctgatttcgggagac
accaaactttcgcacgaagtcgagcttctgaagcgcttgatcaacgaataa
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