Rhizobium indigoferae: U5G49_000021
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Entry
U5G49_000021 CDS
T09660
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rif
Rhizobium indigoferae
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rif03016
]
U5G49_000021 (miaB)
Enzymes [BR:
rif01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
U5G49_000021 (miaB)
Transfer RNA biogenesis [BR:
rif03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
U5G49_000021 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
WQN35002
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All DBs
Position
complement(18403..19836)
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AA seq
477 aa
AA seq
DB search
MTQDSALLPAPKAIPHEGPNEALSDGSNSRKVFIKTYGCQMNVYDSTRMSDALARDGYEP
TEDMEEADLVLLNTCHIREKAAEKVYSALGRLREIKKKKAADGREMMIGVAGCVAQAEGE
EILRRAPAVDVVIGPQTYHRLPEALRRAKQGQRVVDTEYAIEDKFEHLPIAESRKIRARG
VTAFLTVQEGCDKFCTFCVVPYTRGSEVSRPVSQIVEEAEKLAEGGVREITLLGQNVNAW
HGAGPRGEAWSLGDLLYRLAEIPGLARLRYTTSHPRDMDDRLINAHRDLRALMPYLHLPV
QSGSDRILKAMNRRHTAAEYLALIARIRTVRPDIALSGDFITGFPGETDKDFEDTLRLVE
EVRYAQAFSFKYSTRPGTPGAELKDQVPEEIKAERLERLQMLLLKQQQEFAESCIGKEID
LLLEKPGRMPEQLIGRSPWLQSVNVDAKASQIGDIIKVRITGTGTNSLFAERAEAAV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgacacaggacagcgcccttctcccggccccgaaggcaatcccccacgagggccccaac
gaggccctcagcgacggcagcaacagccgcaaggtcttcatcaagacctacggctgccag
atgaacgtctacgattcgacgcgcatgagcgatgccctcgcccgcgacggctatgagccg
acggaagatatggaagaggcggatctcgttctcctcaacacctgccatatcagagagaag
gcggccgagaaggtctattcggcgcttgggcggctgcgcgagataaaaaagaagaaggcg
gcggacggccgggagatgatgatcggcgttgccggctgtgtcgcccaggccgaaggcgag
gagatcctgcgccgcgcgcctgccgtcgacgtcgtcatcggcccgcagacctatcaccgc
ctgccggaggcgctgcgccgggccaaacaaggccagcgcgtcgtcgataccgaatatgcg
atcgaagacaaattcgagcatctgccgatcgccgagagccgaaagatccgcgcccgcggc
gttaccgccttcctgacggtgcaggagggctgcgacaagttctgcactttctgtgtcgtg
ccctatacacgcggctcggaagtgtcgcggccggtttcccagatcgtcgaggaagccgaa
aagctcgccgaaggcggggtgcgcgagatcaccctgctcgggcagaacgtcaacgcctgg
cacggcgccgggccgcggggcgaggcatggagcctcggcgacctgctctaccggctggcc
gagatccccggccttgcccggctgcgctataccacaagccatccgcgcgacatggacgac
cggctgatcaatgcccatcgggacctcagggcgctgatgccctatctgcacctgccggtg
cagtcgggttcggaccgcatcctgaaagcgatgaatcggcgtcatacggcggccgaatat
ctggcgctgattgcgcgcatccgcacggtgcggcctgacatcgcactgtcgggcgatttc
atcaccggctttccgggggagacagacaaggattttgaggatacactgaggcttgtggag
gaggtccgttatgcacaggccttctcgttcaaatactcgacacggccgggcacacccggc
gcggaactgaaggaccaggtgccggaagagatcaaggcagaacggctggaacgcctgcaa
atgcttctcctgaagcagcagcaggaatttgccgaatcctgcatcggcaaagagattgac
ctgttgctcgaaaagcccggtcgcatgccggaacaactaatcggacgttctccctggctt
caatctgtgaatgttgatgcaaaagcatcgcaaatcggtgacattatcaaagtgcgaatc
acaggaaccggaacgaacagcctgtttgccgaacgcgcagaggctgcggtttaa
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