Rhizobium indigoferae: U5G49_000133
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Entry
U5G49_000133 CDS
T09660
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rif
Rhizobium indigoferae
Pathway
rif00061
Fatty acid biosynthesis
rif00071
Fatty acid degradation
rif01100
Metabolic pathways
rif01212
Fatty acid metabolism
rif02024
Quorum sensing
rif04146
Peroxisome
Module
rif_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
U5G49_000133
00071 Fatty acid degradation
U5G49_000133
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
U5G49_000133
09145 Cellular community - prokaryotes
02024 Quorum sensing
U5G49_000133
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rif01004
]
U5G49_000133
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rif04147
]
U5G49_000133
Enzymes [BR:
rif01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
U5G49_000133
Lipid biosynthesis proteins [BR:
rif01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
U5G49_000133
Exosome [BR:
rif04147
]
Exosomal proteins
Exosomal proteins of breast milk
U5G49_000133
Exosomal proteins of breast cancer cells
U5G49_000133
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
WQN35112
UniProt:
A0ABZ0Z905
LinkDB
All DBs
Position
complement(123929..125629)
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AA seq
566 aa
AA seq
DB search
MNSISVHPNGARPDKPWLAAYPDIVPAEIPPLEYASLAELLEKSCARYADRTAFSSMGKG
MRYRELESQTRKLAAWLQSTGLQKGDRVAVMMPNVLQNPIATYAILRAGLVVVNVNPLYT
PRELEHQLKDSGAKAIFVLENFARTVEQVLNKTDLRHVVVTSLGEMLGPKGLIVNFVVRK
VKKLVPSWSIPQHKSFGQVLREGAGKKLQPVTLTGSDIAFLQYTGGTTGVAKGAVLTHQN
LLANKVQLSLWLRSAFERKKEPEVLNFLCALPLYHIFALTVNSLMGMSLGAHNILIANPR
DIPGLVKEFEKSKVHIFPGLNTLFNAMMNNADFAKLDFSSLIMSLGGGMAVQRPVADRWL
KMTGTAVTEGYGLSETSPVATANRFDSAEFTGTIGLPLPSTDLDIRDEAGNSLPLGDVGE
ICIRGPQVMAGYWQKPEETARVMTDDGYFRSGDMGFMDDRGYTKIVDRKKDMILVSGFNV
YPNEIEEVAAMHAGILEAAAIGVPDGHSGEAVKLFVVRKDPNLTEAEVKAHCIANLTNYK
RPRFIEFRTELPKSPVGKILRKDLRG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcatttccgtccatccaaacggcgccaggccggacaagccctggcttgccgcc
tatcccgatattgttccggcagagattccgccgctggaatatgcctcgcttgccgaactg
ctggaaaaatcctgcgcccgttacgccgaccggaccgccttttccagcatgggcaagggg
atgcgctaccgcgaactggagagccagacgcgcaaactcgccgcctggctgcagagcacc
ggccttcagaagggcgaccgcgtcgccgtgatgatgccgaacgtgctgcaaaacccgatc
gccacctatgccatcctgcgcgccggcctcgtcgtggtgaacgtcaacccgctctatacg
ccgcgcgaactcgaacaccagttgaaggattccggcgccaaggcgatcttcgtgctggag
aatttcgcccgcacggtggagcaggttctcaacaagaccgaccttcgccatgtcgtcgtc
acctcgctcggggaaatgctggggccaaaggggctgatcgtcaatttcgtcgtgcgcaag
gtgaagaagctcgttccctcctggtcgatccctcagcacaagagcttcggccaggtgctc
cgcgaaggtgcgggaaaaaagctccagccggtcacgctgacaggcagcgacatcgccttc
ctgcaatataccggcggcacgacgggcgttgccaagggcgcggtgctgacgcatcagaac
ctgctcgccaacaaggtgcagctgtcgctctggcttcgatccgccttcgagcgcaagaaa
gagccggaggtgctgaatttcctctgcgccctgccgctctaccacatcttcgcgctgacg
gtgaattcgctgatgggcatgtcgctcggcgcccacaatatcctgatcgccaatccgcgc
gacattcccggtctcgtcaaggaattcgaaaagtcgaaggtccatatcttccccggcctc
aacacgctgttcaatgcgatgatgaacaatgccgatttcgccaagctcgacttctcctcg
ctgatcatgtcgctcggcggcggcatggctgtgcagcgcccggtcgccgaccgctggctg
aagatgacaggcacggcagtcacagagggctacggcctttccgagacatcgccggttgcc
accgccaaccgcttcgattcggcggagttcaccggcacgatcggcctgccgcttccctcc
accgacctcgatatccgcgacgaggcgggcaattcgctgccgctcggcgacgtcggcgag
atctgcattcgcgggccgcaggtgatggccggctactggcagaagcctgaggagacggcg
cgggtgatgaccgatgacggctacttccgctcaggtgacatgggcttcatggacgaccgc
ggctataccaagatcgtcgaccgcaagaaggacatgatcctcgtctccggcttcaacgtc
tatcccaacgagatcgaggaagtcgccgccatgcatgccggcatcctcgaggccgcagcc
atcggcgtgccggacggacattcgggcgaggcggtaaaactcttcgtggtcaggaaggat
ccgaacctgacggaagcggaggtcaaagcccactgcatcgccaacctcaccaactacaag
cggccgcgcttcatcgagttccgcaccgagctgccgaagtcgcctgttggtaagatcctg
cgcaaggacctgcgcggctga
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