Rhizobium indigoferae: U5G49_000519
Help
Entry
U5G49_000519 CDS
T09660
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
rif
Rhizobium indigoferae
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rif03009
]
U5G49_000519
Enzymes [BR:
rif01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
U5G49_000519
Ribosome biogenesis [BR:
rif03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
U5G49_000519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Extensin_1
Motif
Other DBs
NCBI-ProteinID:
WQN35482
LinkDB
All DBs
Position
519607..521718
Genome browser
AA seq
703 aa
AA seq
DB search
MTPKDKPKRPGAKPLSRDIRSKAGPKADGEKPAKPAAARTIAAETDGEAKAERISKVMAR
AGVASRRDIERMIMEGRVTLNGRVLETPVVNVTLADRIEVDGVPIRGIERTRLWLYHKPA
GLVTTNADPEGRSTVFDNLPDELPRVMSIGRLDINTEGLLLLTNDGGLARALELPATGWL
RRYRVRAHGEIDQDALDKLKDGIAVDGVLYGSIEATLDRTQGSNVWITMGLREGKNREIK
NVLGALGLDVNRLIRISYGPFQLGDLPEGHVIEVRGRTLRDQLGPRLIEEAKANFDAPIY
NAPAVAAEEEAEPAAPEKRERPRRDEDKRERALSRLDTKRDDRHGGARKEDDRRDGGRRD
DERPKRPQPLGQRRSANVWMAPGARPLGEKAAAKAAKNAQTARRRGEPAPAKNDRIEDRP
RTQVNRVREEDGEWIRSSEQPRRKDEGEGFGRKRSFGDRPAREDRGFGDRPARGERPFSD
RPSRGDRPFGDKPRGDRKPRAEADERPRAARTSAGEGRSERPRGDRPFGDRPSRGDRPFG
DKPRGDRKPRTDGDERPRAARTSAGEGRSERPRGDRPFGDRPSRGDRPFGDKPRGDRRPR
EDGDERPRAARSFAGEGRSERPRGERPFGDKPSGDRPSGDRPRGKGFAAKPGGAKPGGAK
SFSGKPKGAKPGGDRPGGDRPAGGPSRGGAKGKGMTRGADRRR
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgacacccaaagacaagccaaaacgcccgggcgcaaagcccctttcacgggatatcagg
tcgaaagccggcccgaaggcggacggcgagaagccggcaaagcctgcggccgcacgcacg
atcgccgccgagaccgatggtgaggccaaggccgaacgcatttccaaggtgatggcgcgc
gccggcgttgcctcccgccgcgacatcgaacgcatgatcatggaaggccgtgtgacgctg
aacggcagggtgctcgaaacccccgtcgtcaacgtcacgctcgccgatcggatcgaagtc
gacggcgtgccgatccgcggcatcgagcgcaccaggctgtggctctatcacaagcccgcc
ggcctcgtgaccaccaatgccgatccggagggccgctcgaccgtgttcgacaacctgccg
gacgagctgccgcgcgtcatgtcgatcggccgcctcgacatcaacaccgaaggcctgctg
ctgctgaccaatgacggtggtctcgcccgggcgctcgagctgccggcgaccggctggctg
cggcgctaccgcgtccgcgcccatggcgagatcgatcaggacgcgctcgacaagctgaag
gacggcatcgccgtcgacggtgtgctctatggctcgatcgaggcgacgctcgaccgcacg
caaggctcgaacgtctggatcaccatgggccttcgcgaaggcaagaaccgcgaaatcaag
aacgtgctcggcgcgctcggcctcgacgtcaatcgcctgatccgcatttcctatggcccg
ttccagctcggcgacctaccggaaggccatgtgatcgaagtgcgcggccggacactccgc
gaccagctcggcccgcgcctcatcgaggaagccaaggcgaatttcgacgcgccgatctac
aatgcgccggccgtcgctgccgaggaagaggcagagcccgcagcaccggaaaaacgcgag
cgtccgcgccgcgacgaggacaagcgcgaacgggcgctgagccgcctcgacaccaagcgc
gacgaccgccacggtggcgcgcgcaaagaggacgaccgccgcgatggcgggcgccgggac
gatgaaaggccaaagcgtccccagccgctcggccagcgccgcagcgccaatgtctggatg
gcgccgggcgcccggccgctcggcgaaaaggctgctgcgaaagccgccaagaatgcgcag
accgcgcgccggcgcggcgagccggcgcctgccaagaatgatcgcatcgaggatcgcccg
cgcacacaggtgaaccgcgtgcgcgaagaggatggcgaatggatccgctcgagcgagcag
ccccgtcgcaaggatgagggcgagggcttcggccgcaagcgttccttcggggatcgcccc
gcccgcgaagaccgcggttttggcgaccgcccggcgcgcggcgaacggccgttcagtgat
cgtccctcgcgtggggatcggcccttcggcgacaaaccgcgcggtgatcgcaagccgcgt
gcggaagctgacgagcgtcctcgtgccgccagaacctccgccggcgaaggccgttcggag
cgtccgcgcggcgaccggccgttcggtgatcgcccctcgcgtggggatcggcccttcggc
gacaagccgcgcggtgatcgcaagccgcgtacggacggcgacgagcgtccccgtgccgcc
agaacctccgccggcgaaggccgttcggagcgtccgcgcggcgaccggccgttcggtgat
cgcccctcgcgtggagaccggcccttcggcgacaaaccgcgtggcgatcgcaggccgcgc
gaggacggtgatgagcgtccgcgggcagccagaagctttgccggagaggggcgctctgag
cgtccgcgcggtgaaagaccgttcggggacaagccctcgggtgacaggccttctggtgac
aggccgcgcggcaagggctttgcggccaagcccggtggggccaagcctggtggggccaag
agtttttccggcaagccgaaaggcgccaagcccggcggtgacagaccgggcggcgatagg
cctgcaggcgggccgtccagaggtggtgctaaaggaaagggaatgacgcgcggtgcggat
cgtcggcggtga
DBGET
integrated database retrieval system
