Rhizobium indigoferae: U5G49_000596
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Entry
U5G49_000596 CDS
T09660
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
rif
Rhizobium indigoferae
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rif03009
]
U5G49_000596
Enzymes [BR:
rif01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
U5G49_000596
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
U5G49_000596
Ribosome biogenesis [BR:
rif03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
U5G49_000596
23S rRNA modification factors
U5G49_000596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
SYY_C-terminal
Methyltransf_23
Methyltransf_25
S4_2
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
WQN35557
LinkDB
All DBs
Position
complement(603592..604377)
Genome browser
AA seq
261 aa
AA seq
DB search
MLATGGFAGHAQPMSDQNTQRLDQLLVSLGLFASRSRARDAVQRGTVRIGGQVVTKAGAL
FGADAAIEIDDPAQDYVSRAALKLAAALDHFRLDPAGHHCLDVGASTGGFTEVLLQRGAQ
HVTAIDVGHGQMHPRISGDPRVTNREGLNARNLTAEDIGHPATFIVSDVSFITLKLALAP
ALEIAEPGAVAILLVKPQFEAGREAIGKGGMLKDPSSAPAVAAELERWFIEDMGWKSLGL
IPSPISGGDGNQEFLLAGLKP
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcaaccggcggctttgccggtcatgcacagccgatgtcagatcaaaacacccaa
cgcctcgaccagcttctcgtctctctcggcctctttgccagccgttcacgcgcccgcgac
gccgtgcagcgcggcaccgtcaggatcggcggccaagtggtcacgaaggccggcgcgctg
tttggcgccgacgcggcaatcgagatcgacgatccggcgcaggactatgtctcccgcgcc
gcgctgaagcttgccgcagccctcgaccatttccggctcgatcctgccggccatcactgt
ctcgatgtcggcgcctccaccggcggcttcaccgaggtgctgctgcagcggggtgcccag
catgtcaccgcgatcgatgtcggccatgggcagatgcatccgcgcatatcgggcgatccg
cgggtgacgaacagggaaggcctcaacgcccgaaacctgacggcagaggatatcggccat
cccgcaaccttcatcgtttccgacgtctccttcatcacgctgaagctggcgctcgcgccg
gctcttgagatcgccgaaccgggcgctgtcgccatcttgctggtcaagccgcagttcgag
gccgggcgcgaggcgatcggcaagggcgggatgctgaaggacccctcgtctgctcccgcc
gtcgctgcggaactggagcggtggttcatcgaggacatgggctggaaaagcctcggcctc
atcccctccccgatttccggcggtgacggcaatcaggaattccttctggcaggattgaaa
ccgtga
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integrated database retrieval system
