Rhizobium indigoferae: U5G49_000844
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Entry
U5G49_000844 CDS
T09660
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
rif
Rhizobium indigoferae
Pathway
rif02010
ABC transporters
rif03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
U5G49_000844
03070 Bacterial secretion system
U5G49_000844
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rif02000
]
U5G49_000844
02044 Secretion system [BR:
rif02044
]
U5G49_000844
Transporters [BR:
rif02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
U5G49_000844
Secretion system [BR:
rif02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
U5G49_000844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_29
ABC_ATPase
AAA_18
AAA_16
AAA_22
Zeta_toxin
AAA_21
NB-ARC
HUTI_composite_bact
PRK
nSTAND3
AAA_33
DUF6394
DUF87
DUF7802
Motif
Other DBs
NCBI-ProteinID:
WQN35793
LinkDB
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Position
825992..828139
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AA seq
715 aa
AA seq
DB search
MDGVVSQHLDSGLRALCGIAAFYRIAADPAQLQHDLALKGRTSQAIDIQRAAKIIGLKAR
VVEKVTEQRLRAMPVPAIVQVRSGTFQVLAGLNPSGKYRLVDPITRADREITPSDILAEI
DGRVILVGRRIRGEGSDPREFGLKWFLPSIWRYRKPLAHVLLASLFVQIFALITPLFFQI
VVDKVLTHKGYSTLFVLVAGIAIIGLFDVMLQYLRAYALAHTTNRIDVELGQRLFHHLLR
LPLEYFETRSAGQTVARVRELETIRAFLTGQGLFSALDVVFIFVFIAVLFAYSWSLTLIV
IAAIPIYILIGSVVRPPLREFVKEKFNRGAASQQFLVEAIVGVHTVKSAAVEPVMQAQWE
EKLAAYVRTAFDTTLLGVGGQNAIQYVSKLSTAALLLFGARAVIEGELSVGSLVAFNMIA
GQVTQPILRLSQLWQDFQQVQISVDRLGDILNTPMERQPKTRSSLPVPKGKIELRNVTFR
YRPGSPEVLKNVSLEIKPGEIIGIVGASGSGKSTLAKLVQRLYVPEEGQVLLDGMDLSQL
DPAWLRSNIGVVLQENLLFNRTIHDNIAFSNPAMQRAQVIAVAKLAGADEFILRLPHGYD
TMIEERGANLSGGQRQRIAIARALATAPPILIFDEATSALDYESERVVQTNMHQIAAGRT
VIIIAHRLAAVRPCNRIIGMGDGRIAEVGSHDDLLKRSDGLYARLWALQNDRGAA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggatggcgtcgtttcgcagcatctggactccggtcttcgtgcgctctgcggtatcgct
gcattctatcgcattgctgccgacccggctcagctgcagcacgacctggcgttgaagggg
cgtacgtcccaggccatagacattcagcgagcagccaagatcatcggacttaaggcgcgc
gtcgtggagaaggtcacggagcaacgtcttcgagccatgcccgtccccgccattgtccaa
gtgcgcagcggaacctttcaggtgctcgccgggttgaatccgtccgggaagtatcgactt
gtcgatccgataacgcgtgctgatcgcgaaattactccatcagatattttagccgaaatc
gacgggcgtgttattcttgtaggccggcgcataaggggcgaagggtccgacccgcgagaa
ttcggtctcaagtggtttctgccatcgatctggcgctatagaaagccgctcgcacatgtg
ttgcttgcctcgctgtttgtgcagatcttcgcgctcatcacacctttgttctttcagatt
gtggtcgacaaggtcctgacgcacaaaggctattcgaccctgttcgtgcttgtcgccggt
atcgcgatcattggcctcttcgatgtgatgcttcaatatctgagagcctatgcgttggct
cacacaacgaatcggatcgatgttgagctcggccaacgattgttccatcatctgctacgg
ctgccgctggagtacttcgagacgcgatctgccggacagaccgtcgcccgcgtccgcgaa
cttgaaacgatccgcgcgtttctgaccgggcaggggttgttttcggcgcttgacgtcgtt
ttcatttttgtcttcatcgcggttcttttcgcttattcctggagcctgacgctgatcgtc
atcgccgccatcccgatctacattctgatcggaagcgtggttcgaccgccattgcgcgaa
ttcgtcaaggagaagttcaatcggggcgcggcaagccagcagttcctggtcgaagccatt
gtcggagtccacacggtgaagtccgcggcggtggagccggtgatgcaggcgcagtgggaa
gagaagctcgcagcttacgtgcgaacagccttcgatacgaccctgcttggcgttggcgga
caaaacgccattcaatatgtaagcaagctttcgacggccgcccttcttcttttcggtgcg
agggccgtaatcgaaggcgagctttccgttggctctcttgtcgccttcaacatgattgcc
gggcaggtcacccagccgattttgaggctgtcccaactctggcaagatttccagcaggtg
cagatctcggtcgatcggctcggtgacattctgaacacgccgatggaacgtcagccaaaa
acccgttcgtcgttgccggtaccaaaggggaaaatcgaacttcgaaacgtaacgttccgt
tatcggcccggttctccggaggtcttgaaaaatgtatcacttgaaataaagccgggagag
atcatcggtatcgtcggcgcctcgggctccggaaagtcgacgctcgcaaaactggtgcag
cgtctttatgtccccgaagaggggcaggtccttcttgatggcatggatctatcccagctc
gatcccgcctggcttcggagcaacatcggagtggttcttcaggagaacctgctgttcaac
cgtacgatccacgacaatatcgctttttcaaatccggcgatgcagcgggctcaggttatt
gcggttgccaagctcgccggagcggatgaattcattttgcggttgccgcacggctacgac
acgatgatcgaagagcgcggcgcaaacctgtccggtggccagcgtcagaggatcgccatt
gcccgtgcgcttgcaaccgccccaccgatcctgattttcgatgaagcgaccagcgccctc
gactatgaaagcgaacgcgtcgtgcaaaccaacatgcaccagatcgccgccggccgaacg
gttatcatcatcgcgcatcggctcgccgccgtgcggccttgcaaccggatcatcggcatg
ggtgacgggcgcatagcggaagttggcagccatgacgatctgctcaagcgctcggacggg
ctctatgcacgactttgggccttgcagaacgacagaggcgccgcatga
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