Rhizobium indigoferae: U5G49_001306
Help
Entry
U5G49_001306 CDS
T09660
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
rif
Rhizobium indigoferae
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rif01002
]
U5G49_001306
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rif01011
]
U5G49_001306
Peptidases and inhibitors [BR:
rif01002
]
Cysteine peptidases
Family C82
U5G49_001306
Peptidoglycan biosynthesis and degradation proteins [BR:
rif01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
U5G49_001306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
WQN36244
LinkDB
All DBs
Position
1276204..1277505
Genome browser
AA seq
433 aa
AA seq
DB search
MSKKNGIEALSRRAFLASAATVGASAIAAPAFAQSALDTLINAPRRGNWDDQFDAKAASR
TATAMVSNTPILGPQSVASAQQAIMQYQQIAAAGGWPEVNPGDQRLQLGVSSPSVQALRQ
RLAITGDLPREAGMSNAFDSYVDGAVKRFQARHGLPSDGVLGEFTLKAMNIPADVRLQQL
NTNLIRLQTFPEDMGRRHLMVNIPAAYVEAVEDGSVATRHTAVVGRLSRPTHLVNSKIYE
VILNPYWTAPRSIVEKDIMPLMRKDPTYLEKNAIRLIDGKGNEVAPETVDWNGEAPNLMF
RQDPGKINAMASTKINFYNKNGEYMHDTPQQGLFNKLMRFESSGCVRVQNVRDLTNWLLR
ETPGWSRQQMEQVIATGVNTPIKLAAEVPVYFVYISAWGMPDGIVQFRDDIYQMDGNAEL
ALDTTAGMEQPVQ
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaaaaacggaattgaagctctctcgcgccgcgcattccttgcgtccgcggca
acggttggcgccagcgcgattgctgcgccggcattcgcgcaatcggcgctcgatacgctg
atcaatgcgccgcgccgcggcaactgggacgaccagtttgacgccaaggcggcttcgcgc
acggcgaccgccatggtttccaacacgccgatcctcggcccgcagtcggttgcgagcgcg
cagcaggcgatcatgcagtatcagcagatcgccgcagccggcggctggcctgaggtcaat
cccggtgaccagcgcctgcagctcggcgttagctctccttccgtccaggcgctgcgccag
cgccttgcgatcaccggcgacctgccgcgcgaagccggtatgtccaacgccttcgattcc
tatgtcgatggcgccgtcaagcgcttccaggcccgccacggtctgccgtccgatggtgtt
ctcggcgaattcacgctgaaggcgatgaacattcctgccgatgtccgcctgcagcagctg
aacaccaatctgatccgcctgcagaccttccccgaagacatgggccgccgtcacctgatg
gtcaacatcccggccgcttatgtcgaggctgtcgaagacggcagtgtcgcgacgcgccac
accgcggttgtcggccgcttgagccgcccgacgcatctcgtcaattcgaagatttacgag
gtcatcctcaatccttactggacggcgccgcgctcgatcgtcgaaaaagacatcatgccg
ctgatgcgcaaggatccgacctatctcgaaaagaacgccatccgcctgatcgacggcaag
ggcaatgaagtcgcccccgaaaccgtcgattggaacggcgaggcgccaaatctgatgttc
cgtcaggaccccggcaagatcaacgccatggcctcgacgaagatcaacttctacaacaag
aacggcgagtatatgcacgacacgccgcagcagggcctgttcaacaagctgatgcgcttt
gaatcgtcgggctgcgtccgcgttcagaacgtccgcgacctgacaaactggctgttgcgc
gagacccccggctggagccgccagcagatggagcaggtgattgcaaccggcgtcaacacg
ccgatcaagctcgctgccgaagttcctgtatatttcgtttacatctccgcctggggcatg
cccgacggcatcgtccagttccgcgacgacatctatcagatggacggcaatgccgagctg
gcgctcgacaccacggcgggcatggagcagccggtccagtaa
DBGET
integrated database retrieval system
