Rhizobium indigoferae: U5G49_001307
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Entry
U5G49_001307 CDS
T09660
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rif
Rhizobium indigoferae
Pathway
rif00260
Glycine, serine and threonine metabolism
rif00460
Cyanoamino acid metabolism
rif00630
Glyoxylate and dicarboxylate metabolism
rif00670
One carbon pool by folate
rif00680
Methane metabolism
rif01100
Metabolic pathways
rif01110
Biosynthesis of secondary metabolites
rif01120
Microbial metabolism in diverse environments
rif01200
Carbon metabolism
rif01230
Biosynthesis of amino acids
rif01240
Biosynthesis of cofactors
rif04981
Folate transport and metabolism
Module
rif_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
U5G49_001307 (glyA)
09102 Energy metabolism
00680 Methane metabolism
U5G49_001307 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
U5G49_001307 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
U5G49_001307 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
U5G49_001307 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
U5G49_001307 (glyA)
Enzymes [BR:
rif01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
U5G49_001307 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WQN36245
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All DBs
Position
1277722..1279020
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AA seq
432 aa
AA seq
DB search
MTNASTESFFNRSLADVDPDIFGAIGKELGRQRHEIELIASENIVSRAVLEAQGSIMTNK
YAEGYPGKRYYGGCQFVDIAEELAIERAKKLFGVNFANVQPNSGSQMNQAVFLALLQPGD
TFMGLDLNSGGHLTHGSPVNMSGKWFNVVSYGVREGDNLLDMDEVERKAKETKPKLIIAG
GTAYSRIWDWKRFREIADSVGAYLMVDMAHIAGLVAGGVHPSPFPHCHVATTTTHKSLRG
PRGGVILTNDEDLAKKFNSAVFPGLQGGPLMHIIAAKAVAFGEALQPEFKDYAAQVVKNA
KALAETLISGGLDVVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYVTCNKNGIPFDPEK
PFVTSGVRLGAPAGTTRGFKEAEFREIGNLIVEVLDGLKVANSDEGNAAVEAAVRGKVVN
LTDRFPMYGYMG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatgcttccaccgaatccttcttcaatcgctcgcttgcggacgtcgatccggac
attttcggcgcgatcggaaaggaactcggtcgccaacggcacgagatcgaactgatcgct
tctgagaacatcgtctcccgcgccgtgctggaagcccagggctccatcatgaccaacaaa
tatgccgagggttatcccggcaagcgttattacggcggctgccagttcgtcgatatcgcc
gaggaactggcgatcgagcgcgccaagaagctgttcggcgtcaatttcgccaacgtccag
ccgaattccggctcgcagatgaaccaggcggtgttcctggcgctgctgcagccgggtgac
accttcatgggtctcgacctgaattcgggcggccacctcacccatggttcgccggtcaac
atgtccggcaagtggttcaacgtcgtctcctacggcgtgcgcgaaggcgacaacctgctc
gacatggatgaagtcgagcgcaaggccaaggaaaccaagccgaagctcatcatcgccggc
ggcactgcctattcccgcatttgggactggaagcgtttccgcgagatcgccgattcggtt
ggcgcctatctcatggtcgacatggcccatattgccggcctcgttgccggtggtgttcat
ccgtcgccattcccgcattgccatgtcgcgacgacgacgacccacaagtcgttgcgcggc
ccacgcggcggcgtcatcctcaccaatgacgaggatctggccaagaagttcaattcggca
gtcttccccggtttgcagggtggcccgctgatgcacatcatcgccgccaaggctgtcgcc
ttcggcgaggcgctgcagcctgaattcaaggattatgccgcccaggtcgtcaagaacgcc
aaggcgctcgccgaaacgctgatatcgggcggcctcgacgtcgtctccggcggcaccgac
aaccacctgatgctggtcgaccttcgcaagaagaacgccaccggcaagcgcgccgaggca
gcgcttggccgcgcctatgtcacctgcaacaagaacggcattcccttcgatccggaaaag
cccttcgtcacctcgggcgtgcgcctcggcgcaccggccggcacgacccgcggcttcaag
gaagctgaattccgcgagattggcaatctcatcgtcgaggtcctcgacgggctgaaggtc
gccaattccgatgaaggcaacgctgccgtcgaagccgctgtgcgcggcaaggtggtcaac
ctcaccgaccgcttccccatgtacggctacatgggataa
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