Rhizobium indigoferae: U5G49_001581
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Entry
U5G49_001581 CDS
T09660
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K07506
AraC family transcriptional regulator
Organism
rif
Rhizobium indigoferae
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rif03000
]
U5G49_001581
Transcription factors [BR:
rif03000
]
Prokaryotic type
Helix-turn-helix
AraC family
U5G49_001581
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Cupin_6
AraC_binding
AraC_binding_2
Motif
Other DBs
NCBI-ProteinID:
WQN36501
UniProt:
A0ABZ0ZA94
LinkDB
All DBs
Position
1544549..1545478
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AA seq
309 aa
AA seq
DB search
MTVDSREQTSPVPLRTSPIGLETYIAGRTLVSGDGPAWTDIFVQVFSRLKVQHPFLVPAV
AEPLVVWVISGQACVEERDLGGEWEANIVRVGDFFLTRSPTPYEMRWHAEGDEPFQVMHL
YLSVPLFDRVAEGVLGKAASAMRLRDISGGRDQHLSSMLELIHAELTAEGQGSRLFVQGL
AQTLAVHLIRQYATFDAEARPSNALPGAKLRRAIAFMEANLQEPFDLARLAQTAGMSAFH
FSRLFKKATGLSPSHYFIRQRIAKAQQLLQETSTSIIEIGMSVGYSSPSHFAQIFRREAG
VSPSDYRRS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgacggttgatagtcgagagcaaacatcgccggttccgcttcgaacatcacctatcggc
ctcgaaacatatattgccggcagaacactcgtcagcggggatggaccggcttggactgat
atattcgtgcaggtattttcccgcctgaaggtgcaacatccctttcttgtcccagcggtc
gccgagcctctcgttgtttgggtgatctcaggtcaggcatgtgtcgaggaacgcgatctg
ggcggggagtgggaggccaatatagtcagagtcggggacttttttctgacgcggtcgccc
acgccatacgaaatgcgctggcacgccgagggagacgaacctttccaggtaatgcatctc
tatctctccgttccgttgtttgaccgggtggcggaaggggttctcggcaaggctgccagc
gccatgcgcctgcgcgacatatcgggcggccgcgaccaacatctctccagcatgctggaa
ctgatccatgctgaactgacggcagaagggcagggaagtcggctcttcgtgcagggattg
gcgcagacgctcgctgttcaccttatccgacaatatgcaacattcgacgcagaggcacgg
ccgtcaaatgccctcccgggcgccaagctacggcgggcgatcgcattcatggaagccaac
cttcaagagccgtttgatctcgcacgtctggcgcaaacggccggcatgagcgcttttcac
ttcagccgcctcttcaagaaggccaccggcctctctccatcccattatttcattcgccaa
cgcatagctaaagcccagcaacttctgcaggaaaccagcaccagcatcatcgagatcggc
atgtccgtggggtattcgagccctagccattttgctcaaattttccgccgggaggctggc
gtctcccccagcgactaccgtcgcagttaa
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