Rhizobium indigoferae: U5G49_001596
Help
Entry
U5G49_001596 CDS
T09660
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rif
Rhizobium indigoferae
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rif03400
]
U5G49_001596
Enzymes [BR:
rif01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
U5G49_001596
DNA repair and recombination proteins [BR:
rif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
U5G49_001596
Prokaryotic type
U5G49_001596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WQN36516
LinkDB
All DBs
Position
complement(1557002..1558453)
Genome browser
AA seq
483 aa
AA seq
DB search
MAKDTAKPVILWFRKDLRLDDNRALDAAHRSGRPIIPLYISEPEAAGTGPLGAAQAWWLH
HSLEALDRSLRKRRSRLVLASGEAFEVLRAFIRESGAEAVFWNRRYDPAGISIDVRIKHE
LEKQAIEARSFGGQLLHEPSRLMTGNGTPYRVYTPFWRALEGGGEPEPPLEAPAKLRLAS
QLPKSEALESWKLLPTKRDWAGDFTDLWTPGEEGAHEKLRAFIEDALDGYKENRDYPARP
ATSMLSPHLAFGEISPARIWDATRGLSKRVAAADVVHFRKEIAWREFSYHLLFHFPRLAS
NNWNERFDGFEWRSDDDDFRAWRRGMTGYPIIDAGMRQLWRHGWMHNRVRMIVASFLIKD
LMIDWRRGEAWFRDTLVDADPANNAASWQWVAGSGADASPFFRIFNPVLQGEKFDPDGKY
VRSYVPELRELGAKYIHRPFEAPRSMLDEAGIALGQTYPKPIVDHALARNRALAAYNATR
DAA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaggacaccgcaaaacctgttatcctctggtttcgcaaggacttgcgccttgac
gacaaccgggctctcgatgccgcccatcgctccgggcgtcctatcatccccctctatata
agcgagccggaggcagcaggcaccggtccgctgggcgctgcgcaggcctggtggctgcat
cattcgctggaagcgctcgacagatcgctgcgcaagcggagaagtcggctggtgctggca
agcggcgaggcgttcgaagtgctccgcgccttcatcagggagagcggggccgaagccgtc
ttttggaaccggcgctacgatccagccggcatctccatcgacgtccgtatcaagcacgaa
ttggaaaagcaggcgatcgaggcaagaagctttgggggccagttgctgcacgaaccttcc
cggctgatgaccggcaacggcacgccctatcgcgtctacacgccattctggcgcgcgctg
gagggcggcggcgaaccggagccgccactggaggcgccggcaaaactgcggcttgcgtcg
caacttccgaaatcagaagcgctggagagctggaagctgctcccgacgaaacgggactgg
gcaggcgattttaccgatctctggacacccggcgaagagggcgcgcatgagaagctgcgt
gccttcatcgaagacgcgctcgacggctacaaggaaaaccgagactatcctgcgagaccc
gcgacgtcgatgctgtcgccacacctggcgttcggcgagatctcccctgcccgcatctgg
gatgccacacgcggcctgtcgaaacgggtcgcagcggccgatgtcgtgcattttcgcaag
gagatcgcctggcgcgaattctcctatcacctacttttccacttcccgcgtcttgcctcg
aacaactggaacgagcgtttcgacggcttcgaatggcgcagcgacgacgacgatttcagg
gcgtggcgccgcggcatgaccggctatccgatcattgatgccggcatgcgccagctctgg
cgccatggctggatgcacaatcgcgtgcgcatgatcgtcgcctccttcctcatcaaggat
ctgatgatcgactggcgccggggcgaggcctggttccgggatacgcttgtcgatgccgat
cccgccaacaatgcggcaagctggcaatgggtggcgggctcgggagctgacgcctcgccg
tttttccgcatcttcaatccggtgctgcagggtgaaaaattcgatcccgacggcaaatat
gtcaggagctatgtgccggagcttcgagagctcggggcaaaatacatccaccggccgttc
gaggcgccgaggagcatgctcgacgaggccggcatcgcgcttggccagacctatccgaaa
ccgatcgtcgatcacgcactcgcccgtaaccgggcgctcgccgcctacaatgccacgagg
gatgccgcatga
DBGET
integrated database retrieval system
