Rhizobium indigoferae: U5G49_001648
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Entry
U5G49_001648 CDS
T09660
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rif
Rhizobium indigoferae
Pathway
rif03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U5G49_001648 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rif03400
]
U5G49_001648 (xth)
Enzymes [BR:
rif01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
U5G49_001648 (xth)
DNA repair and recombination proteins [BR:
rif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
U5G49_001648 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
WQN36564
UniProt:
A0ABZ0ZAE9
LinkDB
All DBs
Position
complement(1610029..1610820)
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AA seq
263 aa
AA seq
DB search
MKIATWNINGVKARIDNLTQWLKDSDPDIVCLQEIKTVDEGFPRLEIEALGYHVETHGQK
GFNGVAILSKSSPFEVNRGLPGDPLDEQARFLEAAFTLSDTRILRVCCIYLPNGNPVETE
KYPYKLAWMERLRTFAAERLAYEDMLVLAGDYNVIPEPHDCFDPKVWENDALFLPQTREA
FRKLENLGLTDAVRATTDATQFYSFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIE
KHVRAWEKPSDHVPVIAYFDFAG
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgcgacctggaacatcaacggcgtcaaggcgcgcatcgacaatctcacgcaa
tggctcaaggattccgatccggatatcgtctgcctgcaggagatcaagacggtcgatgaa
ggtttcccgcggctggagatcgaggcgctcggctatcatgtcgaaacgcacggccagaag
ggcttcaacggcgtcgcgatcctctccaagagttcacctttcgaagtgaaccgcggcctg
cccggcgatccgctggacgaacaggcgcgtttcctcgaagcggcgttcacgctgtccgac
acgcgcatcctgcgcgtctgctgcatctacctgccgaacggcaatcctgtcgaaacggag
aaatatccctacaagctcgcctggatggagcgtctgcggacgtttgcagccgaacggctg
gcctatgaagacatgctggttcttgccggcgattacaatgtcatcccggaaccgcacgac
tgcttcgatcccaaggtctgggaaaacgatgcactgtttctgccgcagacgcgggaggcg
ttccgcaagctcgaaaatctcgggctgacggatgccgtgcgcgcgacgacggatgcgacg
cagttctattccttctgggattatcaggccggcgcctggccgaagaacaacggcatccgc
atcgaccatctgctgttgtcaccggaagccgccgaccggatgacatcggctgcgatcgaa
aaacatgtgcgggcctgggaaaagccgtccgaccacgtgcctgtcatcgcttatttcgat
ttcgcgggctga
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