Rhizobium indigoferae: U5G49_001665
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Entry
U5G49_001665 CDS
T09660
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
rif
Rhizobium indigoferae
Pathway
rif02024
Quorum sensing
rif03060
Protein export
rif03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
U5G49_001665 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
U5G49_001665 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U5G49_001665 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rif02044
]
U5G49_001665 (secDF)
Secretion system [BR:
rif02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
U5G49_001665 (secDF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
Sec_GG
SecD_1st
MMPL
ACR_tran
SecD-TM1
QcrA_N
Motif
Other DBs
NCBI-ProteinID:
WQN36581
LinkDB
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Position
1628954..1631494
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AA seq
846 aa
AA seq
DB search
MLHFSRLKTLLIWLVAFAAIAIAAPNLLTEEQRSSLPDWLRHDRVVLGLDLQGGSHIVLK
VERSDIVKDRLEEAVANVRNALRGAGIRYTGLTGNDQTVTVRITDSAQTQAAVDLLKPLT
TIGGHSGPGVALQQGAEGQLSLQISDAGITADVASARTRSLDIVGRRIAGFGYDNFLVRP
DGADRIVVQVLGSVDAERLKNILNQPAKLSFHLIDESMSGQEALNGRWPATSQVLYSLDD
PPVPYLVDRTAFVTGSNMVDIEPVVDQQTQDTAIAYRLDAEGTQRLAQATGQNIGKHLAI
VFDDQVMSSPVIDAAITGGEGRISANFSEDGVRDLAIMLRAGALPATLTSVEERSVSPRF
GADSIFSGLVAGLVAVVLVAALMIALYRILGVIAVVSLFFNLMLIVAVLSLAGATLTLPG
IAGIVLIVGMAVDSNVLIYERIREEEKTTHSFAEAVGRGFSRAFATIIDANVTIFIAAII
LFFLGSESIRGFAVTLAVGILTTVFTAFTLTRSIVAVWLRARHPRHLPKSVLAHLFEHAN
IRFMGIRRYVFTASAVISLIAMAAFATVGLHLGIDFTGGSLIEVTAKQGNADIADLHSRL
NDLNLGDVRVERTGGPSNARIRIASQGGGENAEQSAATLVRGELQEDYDFRRVDVVGPAI
SGELTMMATLGVLAALAAILIYIWIRFEWQFAVGAIVATLHDVIIMLGLFVLTGIEFNLT
SIAAVLTVVGYSLNDTVVVYDRMRENLKRYKKMPLPILIDASINQTLSRTVLTAATTLTA
LLALFLFGGEVIRSFTFAMLFGVALGTFSSIYIAAPVLIVFRLRPEAPDGEESNKTDAGV
KSGTVV
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatttttcccgcttgaaaacacttctgatttggctggtcgcgtttgcggccatc
gccatcgctgcgcccaatctgctgactgaggagcagcgatcctccctgccggattggttg
cggcacgaccgcgtagtgcttggtctcgacctgcagggcggctcgcatatcgttctgaag
gtcgagcgttccgatatcgtcaaggaccgcctggaagaggcggtcgccaatgtgcgcaac
gcgctgcgcggcgctggcatccgctataccgggctgaccggcaatgaccagaccgtcacc
gtccgcatcaccgattcggcgcagacacaggcggcggtcgatctcctgaagcctttgacg
acgattggcggacattcgggacctggggtcgcgctgcagcagggcgcggaggggcagctc
tcgctgcagatttccgacgccggcattaccgctgacgttgcttccgcgcggacccggtcg
ctcgatatcgttggccgccgtatcgccggattcggctatgataatttccttgttcgcccg
gatggcgccgaccggatcgtcgtgcaggtgctgggatcggtcgatgctgagcggctgaag
aacatcctgaaccagccggccaaactttcctttcatctgatcgacgaaagcatgtcgggg
caggaggcgctgaacggccgttggccggcgacatcgcaggtgctctattcgcttgacgac
ccgccggtaccttatctggtcgaccgcacggctttcgtcaccggcagcaacatggtcgat
atcgagcctgtcgtcgatcagcagacgcaggataccgcgattgcctaccgtctcgatgcg
gaaggtacgcagcggctggcgcaggcgacggggcagaatatcggcaagcaccttgccatc
gtcttcgacgaccaggtgatgtcgtcaccggttatcgatgcggcaatcaccggcggtgag
ggccggatttcggcgaacttctcggaagatggcgtccgcgaccttgcgatcatgctgcgc
gccggcgccttgccggcgacgctgaccagcgttgaggaacgcagcgtcagcccgagattc
ggcgccgattccatcttcagcggcctcgttgccggtctcgtcgccgtcgtgctggtcgcg
gcactgatgatcgcgctctatcgcatcctcggcgtcatcgccgtcgtgtcgctcttcttc
aacctgatgctcatcgtcgcggtgctgagccttgccggcgcgacgctcaccttgcccggg
attgccggcatcgtgctgattgtcggcatggcggtcgactcgaacgttctgatctacgag
cgtatccgcgaagaggagaagaccacccattcctttgcggaggccgtcggccgcggtttc
tcacgcgcatttgcaacgatcatcgatgcgaatgtgacgatcttcatcgccgccatcatc
ctctttttcctcgggagcgaatccatccgcggcttcgcggtgacgctggcggtcggcatc
ctgacgactgttttcacggctttcaccctgacgcgctcgatcgttgccgtctggctgaga
gcgcgccatcctcgacatctgccgaagagcgttctggcgcatctttttgaacacgccaat
atccgcttcatgggaatccgccgttatgtctttacggcgtcggcggtcatttcgctgatt
gccatggccgcctttgccaccgtcggcctgcatctcggcatcgatttcactggcggctcg
ctcatcgaggtgacggcgaagcagggcaatgccgacatcgccgatctccactcgcgcctc
aatgatctcaatctcggcgacgtgcgcgtcgagcgaacgggtggaccgtcgaacgcgcgg
atccgcatcgcttcccagggcggcggcgaaaatgccgagcagtcggcggcgacgctggtg
cgcggcgagctccaggaggactatgattttcgccgcgttgacgtcgtcggacccgcgatc
tcgggcgaattgacgatgatggcgacgctcggcgtgcttgcagcactagccgcgatcctg
atctacatctggatccgcttcgaatggcagttcgcggtcggcgccatcgtcgcaacgctg
cacgacgtcatcatcatgcttggtctcttcgtcctcaccggtatcgagttcaacctgacg
agcatcgccgccgtgctcaccgtcgtcggttattccctgaacgacacggtcgtggtctat
gaccgaatgcgcgaaaatctcaagcgatacaagaagatgccgctgccgatcctgatcgat
gcctcgatcaaccagacgctgtcgcgcaccgttctgaccgcggcgacgacgctgaccgcc
ttgctggcgctgtttctctttgggggcgaagtcatccgctccttcacctttgcgatgctc
tttggcgtcgctctcggcaccttctcttcgatctatatcgccgctcctgtcttgatcgtc
ttccggctgcggccggaggctcccgacggggaagagagcaacaagacggatgccggtgta
aaatccggcacggtggtttga
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