Rhizobium indigoferae: U5G49_001820
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Entry
U5G49_001820 CDS
T09660
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rif
Rhizobium indigoferae
Pathway
rif00010
Glycolysis / Gluconeogenesis
rif00020
Citrate cycle (TCA cycle)
rif00260
Glycine, serine and threonine metabolism
rif00280
Valine, leucine and isoleucine degradation
rif00310
Lysine degradation
rif00380
Tryptophan metabolism
rif00620
Pyruvate metabolism
rif00630
Glyoxylate and dicarboxylate metabolism
rif00640
Propanoate metabolism
rif00670
One carbon pool by folate
rif00785
Lipoic acid metabolism
rif01100
Metabolic pathways
rif01110
Biosynthesis of secondary metabolites
rif01120
Microbial metabolism in diverse environments
rif01200
Carbon metabolism
rif01210
2-Oxocarboxylic acid metabolism
rif01240
Biosynthesis of cofactors
Module
rif_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rif_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rif_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rif_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
U5G49_001820 (lpdA)
00020 Citrate cycle (TCA cycle)
U5G49_001820 (lpdA)
00620 Pyruvate metabolism
U5G49_001820 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
U5G49_001820 (lpdA)
00640 Propanoate metabolism
U5G49_001820 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
U5G49_001820 (lpdA)
00280 Valine, leucine and isoleucine degradation
U5G49_001820 (lpdA)
00310 Lysine degradation
U5G49_001820 (lpdA)
00380 Tryptophan metabolism
U5G49_001820 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
U5G49_001820 (lpdA)
00670 One carbon pool by folate
U5G49_001820 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rif04147
]
U5G49_001820 (lpdA)
Enzymes [BR:
rif01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
U5G49_001820 (lpdA)
Exosome [BR:
rif04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
U5G49_001820 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
FAD_binding_3
FAD_oxidored
NAD_binding_8
HI0933_like
GIDA
DAO
Amino_oxidase
Thi4
Lys_Orn_oxgnase
2-Hacid_dh_C
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
WQN36720
LinkDB
All DBs
Position
1768814..1770262
Genome browser
AA seq
482 aa
AA seq
DB search
MAESYDVIIIGSGPGGYVAAIRASQLGLKTAIVEREHMGGICLNWGCIPTKALLRSAEVL
DHANHFKDFGLVLEGTVKPDAKAVVGRSRAVSARLNAGVGFLMKKNKIDIIWGEAKITKP
GEIVVGKSTKPVVEPQHPLPKNVKSGEGTYTAKHIIIATGARPRALPGIEPDGKLIWTYF
EALKPDVLPKSLIVMGSGAIGIEFASFYRSMGVDVTVVEVMPTIMPVEDAEVTAIARKQL
EKRGLKIFTSAKVTKVEKGAGSVTAHVETADGKVQQITADRLISAVGVQGNIENLGLEAL
GVKTDRGCVVIDGYGKTNVAGIYAIGDVAGPPMLAHKAEHEGVVCVEKIAGLPNVHPTDK
GKVPGCTYCNPQVASVGITEAKAKELGRDIRVGRFSFAANGKAIALGEDQGMVKVIFDKK
TGELLGAHMVGAEVTELIQGFVVAMNLETTEEELMHTIFPHPTVSETMKEAVLDAYGRVL
NA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatcctacgacgtcatcatcatcggctcgggtcccggcggctatgtcgctgcc
atccgtgccagccagctcggcctcaagaccgcgatcgtcgagcgcgagcatatgggcggc
atctgcctgaactggggctgcatcccgaccaaggcgctgctgcgctcggccgaggtgctc
gaccacgccaatcacttcaaggatttcggcctcgttctcgaaggcacggtcaagccggat
gccaaggccgtcgtcggccgctcgcgcgccgtctccgcccgactgaatgccggcgtcggc
ttcctgatgaagaaaaacaagatcgacatcatctggggcgaagcgaagatcaccaagccc
ggcgagatcgttgtcggcaagtcgacgaagcccgttgtcgagccgcagcatccgctgccg
aagaacgtcaagagcggcgagggcacctataccgccaagcacatcatcatcgcgaccggc
gcccgtccgcgcgcgctgcctggcatcgagccggatggtaagctgatctggacctatttc
gaggcgctgaagccggatgtgctgccgaagtcgctgatcgtcatgggctcaggcgcgatc
ggcatcgaattcgccagcttctatcgctcgatgggcgtcgatgtgaccgtcgtcgaagtc
atgccgaccatcatgccggtcgaggatgccgaggtaacggcgatcgcccgcaagcagctt
gaaaagcgcggcctcaagatcttcaccagcgccaaggtcacgaaggtcgagaagggcgcc
ggcagcgttaccgcccatgtcgagacggctgatggcaaggtgcagcaaatcactgccgac
cggctgatttcggccgtcggcgttcagggcaatatcgaaaacctcggtctcgaggcgctc
ggcgtcaagaccgaccgcggctgcgtcgtcatcgacggctacggcaagaccaatgtcgcc
ggcatctatgcgatcggcgatgtcgccggcccaccgatgctggcgcacaaggccgagcat
gagggcgtcgtctgcgtcgaaaagatcgccggcctgccgaacgtccatcccacagacaag
ggcaaggtcccgggctgcacctattgcaatccgcaggtcgcctctgtcggcatcaccgaa
gcgaaagccaaagagctgggccgcgacatccgcgtcggccgcttctccttcgcggcgaac
ggcaaggcgatcgcgctcggcgaagaccagggcatggtgaaggtgatcttcgacaagaag
accggtgaactgctcggcgcccacatggtcggcgccgaagtcaccgagctcattcagggc
ttcgtcgtggcgatgaacctcgaaacgaccgaggaagagctgatgcacacgatcttcccg
catccgaccgtgtccgaaacgatgaaggaagcggtgctcgatgcttacggccgtgtgctg
aacgcttga
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