KEGG   Rhizobium indigoferae: U5G49_001838
Entry
U5G49_001838      CDS       T09660                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
rif  Rhizobium indigoferae
Pathway
rif02020  Two-component system
Brite
KEGG Orthology (KO) [BR:rif00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    U5G49_001838
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:rif02022]
    U5G49_001838
Two-component system [BR:rif02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   U5G49_001838
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 Mg_chelatase AAA_5 AAA_2 AAA MCM FleQ AAA_16 P-loop_TraG nSTAND3 ABC_tran
Other DBs
NCBI-ProteinID: WQN36737
UniProt: A0ABZ0ZD22
LinkDB
Position
1785697..1787061
AA seq 454 aa
MASDILVVDDEHDIREIVSGILSDEGHETRTAHDSDSALAAISDRVPRLIFLDIWMQGSK
LDGLSLLDEIKTRHPELPVVMISGHGNIETAVSAIKRGAFDFIEKPFKADRLILIAERAL
ENSKLKREVSELKRRTGDALELIGTSVAVSQLRQTIEKVSPTNSRIMILGASGSGKELVA
RMIHKKSARANGPFVAINAANITPERMEVALFGTEGTPGQARKIGALEEAHRGILYLDEV
GEMPRETQNKILRVLVDQQFERVGGSKRVKVDVRIISSTAYNLESRIAEGWFREDLYHRL
AVVPVRVPALAERREDIPFLVDQLMRQISEQAGIRPRRIGDDAMAVLQAHDWPGNIRQLR
NNIERLMILARTDGPDAPITADMLPTDLGDMLPKVSAKNDYHIMTLPLREAREMFEKDYL
IAQINRFGGNISRTAEFVGMERSALHRKLKSLGV
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggcttctgatattctcgtcgtcgacgatgagcatgatattcgcgagatcgtttccggc
attctctccgacgaagggcacgagacgcgcaccgcccatgacagcgacagcgcgctggcg
gcaatttccgatcgcgtgccgcggctgatctttctcgatatctggatgcagggcagcaag
ctcgatggcctgtcgctactcgacgagatcaagacccgccatccggaattgcccgtcgtg
atgatatcaggccatggcaacatcgagaccgccgtctcggcgatcaagcgcggcgccttc
gatttcatcgagaagcctttcaaggccgaccggctgatcctgatcgccgaacgcgcgctg
gagaattccaagctgaagcgcgaggtttccgagctgaagcgccgcaccggcgacgcactg
gagctgatcggcacatcggtcgccgtttcgcagctgcgccagacgatcgagaaggtgtcg
ccgaccaacagccgcatcatgatcctcggcgcctctggctccggcaaggagctggtggcg
cgaatgatccacaagaagtcggcccgtgccaacggccccttcgttgcgatcaacgccgcc
aacatcacgcccgaacgcatggaggtggcgctgttcggcaccgagggcacgcccggccag
gcgcgcaagatcggcgcgctcgaggaagcccatcgcggcatcctctatctcgacgaagtc
ggcgaaatgccgcgcgaaacgcagaacaagatcctccgcgtcctggtcgatcagcagttc
gagcgggtcggcggttccaagcgtgtcaaggtcgatgtccgcatcatctcctcgaccgcc
tacaatctcgagagccgcatcgccgagggctggttccgcgaggatctctaccaccgcctt
gccgtcgtaccggtgcgtgtgccggcgttggccgaacggcgcgaggacattcctttcctc
gtcgatcagctgatgcgccagatatcagagcaggccggcatccgtccgcgccgcatcggc
gacgacgccatggccgtgctgcaggcgcacgactggcccggcaacatccgccagctgcgc
aacaatatcgagcgactgatgatccttgcccgcaccgacggcccggatgcgccgatcacc
gccgacatgctgccgaccgatctcggcgacatgctgccgaaggtgtccgccaagaacgac
tatcacatcatgacgctgccgctgcgcgaagcccgcgagatgttcgagaaggattatctg
atcgcccagatcaaccgctttggcggcaatatctctcgcaccgcggaattcgtcggcatg
gagcgttcggcgctgcaccgcaagctgaagtcgctcggcgtctga

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