Rhizobium indigoferae: U5G49_001973
Help
Entry
U5G49_001973 CDS
T09660
Name
(GenBank) alpha-amylase family glycosyl hydrolase
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
rif
Rhizobium indigoferae
Pathway
rif00500
Starch and sucrose metabolism
rif01100
Metabolic pathways
rif01110
Biosynthesis of secondary metabolites
Module
rif_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
U5G49_001973
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rif04147
]
U5G49_001973
Enzymes [BR:
rif01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
U5G49_001973
Exosome [BR:
rif04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
U5G49_001973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Alpha-amylase_C
CBM_48
DUF5696
Motif
Other DBs
NCBI-ProteinID:
WQN36869
LinkDB
All DBs
Position
1919241..1921613
Genome browser
AA seq
790 aa
AA seq
DB search
MTVNVQFRFRSGLPLLAFDNVRLRGSWDEQGHPSNDWTSVPMQRSRDEDGYDVFVIRVPF
PDDEIGTHFRWGIELGRPGASSLWAIAGELDDEASSCRERSFDLQQGIGPQTYYLTWIGR
LGANRVEKRDAADGIRFSVWAPNARDVLLVLADPAIGYIADDGTGAVATIKMGRTVDGFW
IAETGDDDGLLDFDSMVGTPYMYRVTKDDGSLAYRTDIWSLMQIGAGDFDPDGATYHGSP
AALDGPQSCSVVCDPKRVVLPSGQELAAEAFWADEFAGGRKLPDRLEDLVIYELHVGALG
FGKAAPGTLDDAIAFVEHLSALGVNAVELLPIAEFETRANWGYGTSHFFAADQGAGGTDR
LKMFVKVCHQRGIVVILDVCYNHFDPDGERAQWAYDSNDHTRNIYYWYEGNPGDYADPRG
GYIDNISTGWAPRFDEEAVRQLFISSAAFLVSVCHIDGFRLDQTSSIHQYPVLHADGRRA
DRAAAFGAKFLKQWTRTMRLIKPQLFLTAEDYSDWSAMTEPSLTGDGLGFDATWYGDFHH
NLVEYHGGAQAQLLKNAGFGDKRALTMSSFAGALQTSARSKVVYNQSHDDCGNREGSART
AVIAVNFAPVVGETRAWAEARSRFAAAMTLLSPGTPMFFMGEEIGAQKPYRYNDFLENRE
NILGEADGDGAGMISCYRDLIALSIHQDAIRSRNIAIPLVHDENRVIAFHRWDDGEDFLV
VGSLNDAPFEHGYRLHSERLGDDLWEEIFNTDAHKYGGWNVGNGGGRIRATAGVLDAVLP
ASGVLVFRRL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcaatgttcaattccggtttcgcagcggcttgccattattggcgttcgacaat
gtccgtctccgcggaagttgggacgagcaaggtcacccctcgaatgattggacgtctgtt
cctatgcagcgctctcgtgacgaggatggctatgatgtctttgtcatcagggtacccttt
cccgatgacgagatcggcacgcattttcgatgggggatcgaactgggtcgacccggcgct
tcaagcctgtgggcgatcgccggcgaattggacgacgaggcctcgtcgtgtcgcgaacgc
tcgttcgatctccagcaggggatcgggccgcagacctattatctgacatggatcggccgc
ctgggagcgaaccgggttgaaaagcgcgacgctgccgatggcatccgcttttcggtctgg
gcgccgaacgcccgggatgtcttgctggtcctggccgatccggccatcggctatatcgcc
gatgacggcaccggagcggtcgcaaccatcaaaatgggaagaaccgtcgacggattctgg
atcgccgaaaccggcgacgatgatggccttttagatttcgacagcatggtcggcacgccg
tacatgtaccgcgttaccaaggatgatggatcgctcgcctaccgcaccgatatctggtcc
ctcatgcagattggcgccggagacttcgatcccgatggagcaacctatcacggatcaccg
gcggcattggacggaccgcaaagctgttcggtcgtctgcgacccgaagcgggtggtgctt
ccgtccgggcaggagcttgccgccgaggcgttctgggctgacgaattcgccggaggtcga
aagcttcccgatcggctcgaggatctggtgatctatgaactgcacgtcggcgccctcggt
ttcggcaaggccgcgccaggcacgcttgatgatgccatcgccttcgtcgagcatctctca
gcgctcggcgtcaacgccgtggaattgctgccgatcgcggaattcgagacccgggccaac
tggggctacggcacgtcgcatttctttgccgccgaccagggtgctggcggcaccgaccgc
ctgaagatgttcgtcaaggtttgccaccagcgcggcatcgttgtcatccttgatgtctgt
tacaaccatttcgatccggatggcgagcgggcgcaatgggcctatgattccaacgatcac
acccgcaatatctactattggtatgagggaaatcccggcgactacgccgatcccagaggc
ggctacatcgacaatatctccacggggtgggcgcctcgctttgatgaggaagccgtccgc
cagcttttcatctcgagcgctgcattcctcgtctccgtctgtcacatcgatggtttccgg
ctggatcagacgagttcgatccatcaatatccggtcctccatgccgacggccggcgcgcc
gatcgggctgccgccttcggggccaagtttctcaagcagtggacccgcacgatgcggctg
atcaagccacagcttttcctgacggctgaagactattcggattggtcggcgatgacggaa
ccaagcctgaccggcgacggactcggcttcgatgcgacctggtacggcgattttcatcac
aacctcgtcgaatatcacggcggcgcacaggcgcagctattgaagaatgccggtttcgga
gacaagcgggctttgaccatgtcgtcttttgccggcgcattgcagacgagcgcgcgatcc
aaggtggtctacaaccagtcgcatgacgattgcggtaatcgtgaaggatcggcacgaacc
gcggttattgcggtcaatttcgcgcctgttgtcggcgagacccgggcatgggcggaggcg
agatcgaggttcgcagcggcgatgacgctgctgtcacctgggacgccgatgtttttcatg
ggcgaggaaatcggcgcccagaagccctatcgctacaatgatttcctcgagaaccgggag
aatattctcggcgaagcggatggtgacggggcagggatgatcagctgttatcgcgatctg
atcgcgctcagcatccaccaggacgccattcgctcgcgcaatatcgccattcccctggtt
cacgacgaaaatcgcgtgatcgcatttcatcgatgggacgatggcgaggatttccttgtc
gtggggtcgctgaacgacgctcccttcgaacacggctaccggctgcacagcgaacgtctg
ggggatgatctctgggaggagatcttcaataccgatgctcacaaatatggcggctggaac
gtcggcaacggcggcggaagaattcgagccacagcaggagtgctcgatgccgtgctgccg
gcatcaggcgttctggtctttcgcaggctgtga
DBGET
integrated database retrieval system
