Rhizobium indigoferae: U5G49_002003
Help
Entry
U5G49_002003 CDS
T09660
Name
(GenBank) mechanosensitive ion channel family protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
rif
Rhizobium indigoferae
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rif02000
]
U5G49_002003
Transporters [BR:
rif02000
]
Other transporters
Pores ion channels [TC:
1
]
U5G49_002003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
WQN36895
LinkDB
All DBs
Position
complement(1958288..1960438)
Genome browser
AA seq
716 aa
AA seq
DB search
MRIINDRHPLRRVRAFVAVVFSTLLLASANPASAAEPTNSSAPIRVIIELPNDDSGRALV
GRIVPGNQEPAQPVAVSQEAAPTSIATSLQDLRQRLLTLVDAVPTLPGQIQSAIRVFQTD
DRIEPVGLILAVILFVAGGFVAQRLAWWSGRGLLHFVLNAPADTVRQRIKLHAARLSMGL
LALVGYLIGSLGAFILFPWPAVFRDIALILLSAALMVRLGVLVGRIVIAPGARLPHMRLL
TLVTSLAWFWYYWLLGIVAVLAAGWATIEVMGTIGASPILADLFTAAWLGVVSIAFIVMI
WLRHFRSDGPPVSRLVCVAFSASILLSWLLWVSGLRAAFWTVIIITLLPLTVSVAHDMIR
RIIQSGEGQAVEDPAIVGWSVVIMQTLRNGLIVVAALLIARAWNVNLSDLAAAETVTTRL
IRAGIRIVIVLLVTDVIWKLASTLIDSQMAVASRSVQEGHQEGPDARRRQRLNTLLPILR
NVLFLAIGAVGFLMILDAVGIQIGPLLAGAGVVGIAVGFGAQTLVKDIISGVFYLFDDAF
RIGEYIQAAKYKGTVEGFSLRSIRLRHHRGPVTIVPFGELGAVQNLSRDWVIDIITLTLN
YDSDLEEVRKTIKRIGVELLEDAELGPNIIEPLKMQGIEQMADYGVQIRLKFMTKPGEQF
GVRRKALAMLKKTFAEKGIQFATPTVHVSGGPADAAASAAATELQRPSKVISTLEE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcatcaacgaccgtcatcccctccgcagagtgcgtgcattcgtggcggtggta
ttttcaacgcttctgctggcgagcgcaaaccccgcctcggcggctgagccgaccaattcc
tcggcgccgatccgggttattatcgaattgccgaatgatgattccggacgagcgctggtc
ggccggatcgttccgggcaatcaggaaccggcgcagccggtggcagtctcgcaagaggcg
gcaccgacttcgattgccacgtcactacaggatttgcgccagaggttgctgacactcgtc
gatgccgttccgacccttcccgggcagatccagtcggcgatccgggtcttccaaacggat
gatcgtatcgaacctgtcggcctgatcttggcggtcatactcttcgtcgcaggcgggttc
gttgcgcagcgccttgcctggtggtcagggcgagggctgctccattttgtgctgaacgcg
cctgccgacaccgttcggcaacggatcaagctccacgccgcccggctttcaatgggtctt
ctcgcgttggtcggttacctgatcggaagtctcggcgcgtttatcctctttccatggcct
gccgtgtttcgcgatattgcgctcatcctgctatcagccgcgctcatggtgcgccttggc
gtgcttgtgggccgtattgtcatcgcgccaggcgcccgtctgccgcatatgcggcttctg
acgcttgtcacctcgcttgcctggttctggtactactggctcctcggaatcgtcgcagtg
ctggcggctggctgggccaccattgaagtgatggggacgatcggggcttcacctatcttg
gccgacctctttaccgcagcatggcttggtgtcgtttcaatcgcttttatcgttatgatc
tggctgcggcactttcgttctgatgggccgcctgtgagccggctggtctgtgtcgccttc
agcgcgagcatcctgctatcgtggctgttatgggtatccgggctccgcgctgcattctgg
acggtgatcatcattacgcttctgccgcttaccgtttcggtggctcatgatatgattcgt
cgcattattcaatccggggaggggcaggcggtcgaggatccggccatcgtcggatggtcc
gttgtcatcatgcaaacgctgcggaacggtctcattgtggtcgccgctctcctcattgcc
cgcgcgtggaatgtcaatctcagtgaccttgccgcagccgaaaccgtgaccacgcgtttg
atccgcgccggaatccgcatcgttatcgtgttgctggtgaccgacgttatctggaagctc
gcaagcacgttgatcgacagtcagatggcggtggcgtcgcgaagcgtgcaggaagggcat
caggaaggacccgatgcacgccggcgtcaacggttgaataccctcctgcccattcttcgc
aatgtactgttcctggcgatcggagccgtcggcttcctgatgatcctggatgccgtcggc
attcagatcggaccgctgctggcaggtgctggcgtcgtcggcatagccgtcggcttcggc
gcccaaacactcgtcaaggacatcatctccggcgtcttttatctgttcgacgatgccttt
cgcatcggcgaatacattcaggcggcgaaatataaagggacggtcgaaggtttctcgctg
cgatcgatccgcttgcgccaccatcgcggtccggtcaccatcgttcccttcggcgaactg
ggcgcggtgcaaaacctcagtcgcgactgggtcatcgacatcattacgctcaccctgaac
tatgacagcgatcttgaggaggtccgcaagaccatcaagcgcatcggcgttgagcttctg
gaggacgctgaactcgggcccaacatcatcgagcctttgaaaatgcaggggatcgagcag
atggcggactacggcgtgcagattcggctgaagttcatgacaaaacccggcgaacagttc
ggcgttcgccgaaaggctctcgccatgctcaagaagacattcgcggaaaaaggcatccag
tttgcaacgccgactgttcatgtttccggcggtcccgccgatgccgcggcttctgctgcc
gcaacggagctgcaaagaccatcgaaagtcatctcgacacttgaggaatag
DBGET
integrated database retrieval system
