Rhizobium indigoferae: U5G49_002187
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Entry
U5G49_002187 CDS
T09660
Name
(GenBank) AraC family transcriptional regulator
KO
K13652
AraC family transcriptional regulator
Organism
rif
Rhizobium indigoferae
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rif03000
]
U5G49_002187
Transcription factors [BR:
rif03000
]
Prokaryotic type
Helix-turn-helix
AraC family
U5G49_002187
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GyrI-like
HTH_18
Cass2
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
WQN37075
LinkDB
All DBs
Position
complement(2134615..2135466)
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AA seq
283 aa
AA seq
DB search
MNGETAWALYENRLRRVSAYIHDHLDEELDMERLAEIACMSSYHWHRIYRAIYGETLAAT
VKRLRLHHAAGEIVRTELAVSEIAKRSGYPNLQSFNRIFKSVYGMPPARYRKEGSHTAYE
PSPDGKTKVMLDVTIRQIAPIELIGVAHTGSYMQIDKAFEMLFGTLYARGLAKPDMRMIG
VYLDDPDLVPEEKLRSIACVTGAADVLADAPFERRVIDGGDYAVLRHKGPYAYMPKSYQW
LFAEWLPKSGRQLKDRVMFEEYLNNPRDVPPTELLTDIHMPLV
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcgaaacggcatgggcactttatgaaaaccgtctgagacgggtttcggcctat
attcacgaccacttggacgaggagctggatatggagcgccttgccgaaatcgcctgcatg
tcgagctatcactggcacaggatctaccgggcgatctacggcgagacgctggcggcaacc
gtcaagcggctcaggctgcatcacgcggcgggcgagatcgtccgcacggaacttgccgtc
agtgaaattgcgaagcgatcaggctatcccaatctccaatccttcaatcgtattttcaaa
tcggtctacggcatgccgccagcccgctaccggaaagagggaagccacacagcctatgag
ccctcacctgacggaaagaccaaagtcatgttagacgttaccatacgccagatcgcgccg
atcgagctgatcggcgttgcccataccggttcctacatgcagatcgacaaggccttcgag
atgctgttcggcacgctttacgcccgcggcctcgccaagcccgacatgcggatgattggc
gtctatctcgacgatcccgatcttgtgccggaggaaaagctgcgctcgatcgcctgcgtc
accggagctgccgacgtgctggccgatgcgccgttcgagcggcgcgtgatcgacggtggc
gattatgcggtgctacgccacaagggtccctatgcctatatgcccaagtcctatcagtgg
ctgtttgccgaatggctgccaaaatccggccggcagttgaaggacagggtcatgttcgag
gaatatctcaacaatccccgcgacgtgccgccgaccgagcttctgacggatattcacatg
ccgctcgtctga
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