Rhizobium indigoferae: U5G49_002296
Help
Entry
U5G49_002296 CDS
T09660
Name
(GenBank) DeoR family transcriptional regulator
KO
K11534
DeoR family transcriptional regulator, deoxyribose operon repressor
Organism
rif
Rhizobium indigoferae
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rif03000
]
U5G49_002296
Transcription factors [BR:
rif03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
U5G49_002296
BRITE hierarchy
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_23
HTH_17
HTH_11
Sigma70_r4_2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
WQN37182
LinkDB
All DBs
Position
2257446..2258168
Genome browser
AA seq
240 aa
AA seq
DB search
MDSRRGRRIAVLSEALSRHRILHIKNAAEILGVSEMTVRRDVSANAGQFAFLGGHIVPAV
EAENDPYEISRAADSHAAAKRQICTQAIDYIHHDDTVFFDCGTTLPYLVDLLPDRIHITA
ICYAMNVADRLTRKPNVRLVMLGGLYHPASASFSGASGLEMLDQLVINVAFLSAAGVDAR
RGATCAHFHEAEIKKKAMSRARKNILLADSSKIGKLKPAFFSDMKSFDVVITENGMNDFD
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggatagtcgcaggggccggcgcatcgcagtcttatccgaggccctttcacgacatcgc
attctgcacatcaagaatgctgccgagatactgggcgtctcggagatgacggttcggcgt
gatgtcagcgccaacgcaggccaattcgcgtttctcggcggccatatcgttccggctgtc
gaagcggaaaacgatccttatgaaatttccagggccgccgacagtcatgccgctgcaaaa
cgacaaatttgcacacaagccattgattacattcaccatgatgacacggtctttttcgat
tgtggcaccaccttaccctatctggtcgatcttctcccagaccggattcacataacggcg
atctgctacgccatgaatgtcgccgatcgtctaacgcgaaaaccaaacgttcgccttgtt
atgctcggtggtctttaccaccccgcatcggcgagcttttccggtgcctcggggctggaa
atgctcgaccagcttgtgatcaacgtggcatttctttctgcagccggtgtcgatgcccgg
cgtggcgcgacctgcgcgcattttcacgaagcggaaatcaagaaaaaggcgatgtctcgg
gcacgaaagaatattcttctcgccgacagcagcaaaatcggcaagttgaaaccagccttt
ttcagcgacatgaagtcgttcgatgtggtcatcaccgaaaacggtatgaacgacttcgac
tga
DBGET
integrated database retrieval system
