Rhizobium indigoferae: U5G49_002350
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Entry
U5G49_002350 CDS
T09660
Name
(GenBank) D-alanine--D-alanine ligase family protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rif
Rhizobium indigoferae
Pathway
rif00470
D-Amino acid metabolism
rif00550
Peptidoglycan biosynthesis
rif01100
Metabolic pathways
rif01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
U5G49_002350
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
U5G49_002350
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
U5G49_002350
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rif01011
]
U5G49_002350
Enzymes [BR:
rif01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
U5G49_002350
Peptidoglycan biosynthesis and degradation proteins [BR:
rif01011
]
Precursor biosynthesis
Amino acid ligase
U5G49_002350
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
ATP-grasp_3
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
WQN37234
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All DBs
Position
2312174..2313250
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AA seq
358 aa
AA seq
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MTPSPHRLRIAVLFGGRSAEHEVSVLSATNVLGALKPEKYDAVPIFITREGQWLLSSFED
GILATPSSGAEICLVPGGRGRMLAIPVHGAPHELARIHILFPVLHGPHGEDGSVQGVAEV
ARVPLAGCGILGSAAALDKDIAKRLLRAAGLPVARAVTIHQGAAPSLAALEGELGLPLFI
KPARQGSSVGVAKVHTSQEFAPALTEAFRHDRTLLAEEFVRGREIEFSVLEDAAGELFVS
RPGEIVPAESHGFYSYDAKYIDEKGAALKVPAELPEEVEAAMHDVAARAFRAVGCDGMAR
IDFFLTDDMQFLVNEINTIPGFTNISMYSKAMAASGVGYAEIIDRLVDHGLARARRVA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaccccttccccacacaggctgcgcattgccgtgctcttcggcggccgctcggccgag
catgaggtttccgtgctctcggcaaccaatgtcttgggcgcgctcaagcccgaaaaatac
gatgccgtccccatcttcatcacccgtgaggggcaatggctgctgagcagtttcgaggac
ggcatattggcgacaccttcatcgggtgcggaaatctgcctcgtgccgggcggacggggc
cggatgctggcgatccctgtccatggcgcgccgcatgaactggcaaggatccacatcctg
tttcccgtgctgcacggcccgcatggcgaagacggctcggtgcagggcgtggcggaggta
gcccgcgttccgctcgccggctgcggcattctcggctccgccgcagcactcgataaggac
atcgccaagcgcctgctgagggcggcgggcctgccggtagcgcgtgcggtgacgatccat
cagggtgctgccccttcgctggcagccctcgaaggtgaactcggcctgccgctcttcatc
aagccggcgcggcagggatcgtcggtcggtgtcgccaaggtccataccagccaggaattc
gcgcccgcccttactgaggcgttccgccatgatcgcacgctgctcgccgaagaattcgtg
cgcggccgcgagatcgaattcagcgtgctggaggatgcggcaggagaactcttcgtctcc
cggccgggcgagatcgtgccggcggaaagccacggcttctatagttacgatgccaaatat
atcgacgagaaaggtgcggcgctgaaagtgccggccgaactgcctgaggaagtcgaggct
gccatgcacgacgtggccgcaagagccttccgggccgtcggttgcgacggcatggcccgc
atcgacttcttcctgactgatgacatgcagttcctggtcaatgaaatcaacaccatcccc
ggcttcaccaatatcagcatgtattccaaagcgatggcggcaagcggcgtcggatacgcc
gaaatcatcgacaggctcgtcgaccacggcctggcgcgcgcccgccgggtcgcctag
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