Rhizobium indigoferae: U5G49_002637
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Entry
U5G49_002637 CDS
T09660
Name
(GenBank) VCBS domain-containing protein
Organism
rif
Rhizobium indigoferae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_4
HemolysinCabind
Pertactin
Motif
Other DBs
NCBI-ProteinID:
WQN37506
LinkDB
All DBs
Position
complement(2572858..2577321)
Genome browser
AA seq
1487 aa
AA seq
DB search
MGTQSTGGGSTTSFSNTPQAKDDSYIWTEDQLLSLQLYNAATKTITLDVMSNDLGGNAKS
LFSVDDGDGNPITADYELLAKDVGANGASAWEKSLLGNWVRINNGKIEYRLSDGSGIAGS
GADINTLSAGEILKDSFVYAIRLGNGTLSEANVSISLTGANDAASIVVDATVTDDRATVE
AGAAGSGDPNASGKLTVSDVDDGEAAFAAPASLNGIYGSFTFNAASGSWTYTLDNNRAAT
QALNQGDAVSDTLSVSSLDGTASHNIVVAITGANDAASIVVDATVTDDRATVEAGAAGSG
DPNASGKLTVSDVDDGEAAFAAPASLNGIYGSFTFNAASGSWTYTLDNNRAATQALNQGD
AVSDTLSVSSLDGTASHNIVVAITGANDAASIVVDATVTDDRATVEAGAAGSGDPNASGK
LTVSDVDDGEAAFAAPASLNGIYGSFTFNAASGSWTYTLDNNRAATQALNQGDAVSDTLS
VSSLDGTASHNIVVAITGANDAASIVVDATVTDDRATVEAGAAGSGDPNASGKLTVSDVD
DGEAAFAAPASLNGIYGSFTFNAASGSWTYTLDNNRAATQALNQGDAVSDTLSVSSLDGT
ASHNIVVAITGANDAASIVVDATVTDDRATVEAGAAGSGDPNASGKLTVSDVDDGEAAFA
APASLNGIYGSFTFNAASGSWTYTLDNNRAATQALNQGDAVSDTLSVSSLDGTASHNIVV
AITGANDAASIVVDATVTDDRATVEAGAAGSGDPNASGKLTVSDVDDGEAAFAAPASLNG
IYGSFTFNAASGSWTYTLDNNRAATQALNQGDAVSDTLSVSSLDGTASHNIVVAITGAND
AASIVVDATVTDDRATVEAGAAGSGDPNASGKLTVSDVDDGEAAFAAPASLNGIYGSFTF
NAASGSWTYTLDNNRAATQALNQGDAVSDTLSVSSLDGTASHNIVVAITGANDAASIVVD
ATVTDDRATVEAGAAGSGDPNASGKLTVSDVDDGEAAFAAPASLNGIYGSFTFNAASGSW
TYTLDNNRAATQALNQGDAVSDTLSVSSLDGTASHNIVVAITGANDAASIVVDATVTDDR
ATVEAGAAGSGDPNASGKLTVSDVDDGEAAFAAPASLNGIYGSFTFNAASGSWTYTLDNN
RAATQALNQGDAVSDTLSVSSLDGTASHNIVVAITGADDGPARQAPTDIKLTPVVPADSV
NFNSFEFSGLLTATDPDAGGFSFSIASQSNPGLFSITDNTLHSDALSTNGTFSVTVTATQ
TGDPIGPAFEKTETFTIITGGNGNSVDNPTGGTGDDMLYGGGGNDMMFGLGGDDTLFGQD
GNDTLNGGAGNNTLTGGVGNDTFFFQKFATTTNHMTDFNAGTNSTTVDRFQLDVGGGTFE
FAVGNNNTSVDNVKVGNNGTINVAGTEVAVKTDVSVTNATVQSTINGYSNITTGALFVFH
NTDLGHAAVYYDQNPSSAGGAVLVAEFDNITTLSGLTNFNSGDFLFS
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgggtacgcaaagcaccggcggcggcagcacgacttctttctccaatacgccgcaggcg
aaggatgactcttacatctggacagaagaccaactgctcagtctccagctctacaatgcg
gccaccaaaaccataaccctcgacgtcatgtcgaatgatcttggcgggaatgccaaatcc
ctcttttcggtcgacgacggtgatggcaatccaattaccgccgactacgagcttcttgcg
aaagacgtcggagcgaatggggcatctgcctgggagaagtccctgctcggcaattgggtc
aggatcaataatggaaagatcgaataccgtcttagtgacggaagcggcatcgcgggctcg
ggcgcggatatcaacacgctgtctgccggtgaaatcctcaaagatagtttcgtctacgcg
atacggctcggcaatggcacgctgagcgaggcaaatgtctcgatctcgctcaccggcgcc
aacgatgcggcttcgatcgtcgtcgatgcgacggtcaccgacgatcgggcgacggtcgag
gcgggtgcggccggcagcggcgatccgaatgcctccggcaagctgacggtcagcgatgtc
gacgacggcgaggcggcgtttgccgccccggcctccctcaacggcatctatggcagcttc
accttcaatgccgccagcggcagctggacctatacgctcgacaataaccgggccgcgacg
caggcgctcaaccagggcgacgccgtcagcgacacgctgagcgtcagctcgctcgacggc
acggccagccacaacatcgtcgtcgccatcaccggcgccaacgatgcggcttcgatcgtc
gtcgatgcgacggtcaccgacgatcgggcgacggtcgaggcgggtgcggccggcagcggc
gatccgaatgcctccggcaagctgacggtcagcgatgtcgacgacggcgaggcggcgttt
gccgccccggcctccctcaacggcatctatggcagcttcaccttcaatgccgccagcggc
agctggacctatacgctcgacaataaccgggccgcgacgcaggcgctcaaccagggcgac
gccgtcagcgacacgctgagcgtcagctcgctcgacggcacggccagccacaacatcgtc
gtcgccatcaccggcgccaacgatgcggcttcgatcgtcgtcgatgcgacggtcaccgac
gatcgggcgacggtcgaggcgggtgcggccggcagcggcgatccgaatgcctccggcaag
ctgacggtcagcgatgtcgacgacggcgaggcggcgtttgccgccccggcctccctcaac
ggcatctatggcagcttcaccttcaatgccgccagcggcagctggacctatacgctcgac
aataaccgggccgcgacgcaggcgctcaaccagggcgacgccgtcagcgacacgctgagc
gtcagctcgctcgacggcacggccagccacaacatcgtcgtcgccatcaccggcgccaac
gatgcggcttcgatcgtcgtcgatgcgacggtcaccgacgatcgggcgacggtcgaggcg
ggtgcggccggcagcggcgatccgaatgcctccggcaagctgacggtcagcgatgtcgac
gacggcgaggcggcgtttgccgccccggcctccctcaacggcatctatggcagcttcacc
ttcaatgccgccagcggcagctggacctatacgctcgacaataaccgggccgcgacgcag
gcgctcaaccagggcgacgccgtcagcgacacgctgagcgtcagctcgctcgacggcacg
gccagccacaacatcgtcgtcgccatcaccggcgccaacgatgcggcttcgatcgtcgtc
gatgcgacggtcaccgacgatcgggcgacggtcgaggcgggtgcggccggcagcggcgat
ccgaatgcctccggcaagctgacggtcagcgatgtcgacgacggcgaggcggcgtttgcc
gccccggcctccctcaacggcatctatggcagcttcaccttcaatgccgccagcggcagc
tggacctatacgctcgacaataaccgggccgcgacgcaggcgctcaaccagggcgacgcc
gtcagcgacacgctgagcgtcagctcgctcgacggcacggccagccacaacatcgtcgtc
gccatcaccggcgccaacgatgcggcttcgatcgtcgtcgatgcgacggtcaccgacgat
cgggcgacggtcgaggcgggtgcggccggcagcggcgatccgaatgcctccggcaagctg
acggtcagcgatgtcgacgacggcgaggcggcgtttgccgccccggcctccctcaacggc
atctatggcagcttcaccttcaatgccgccagcggcagctggacctatacgctcgacaat
aaccgggccgcgacgcaggcgctcaaccagggcgacgccgtcagcgacacgctgagcgtc
agctcgctcgacggcacggccagccacaacatcgtcgtcgccatcaccggcgccaacgat
gcggcttcgatcgtcgtcgatgcgacggtcaccgacgatcgggcgacggtcgaggcgggt
gcggccggcagcggcgatccgaatgcctccggcaagctgacggtcagcgatgtcgacgac
ggcgaggcggcgtttgccgccccggcctccctcaacggcatctatggcagcttcaccttc
aatgccgccagcggcagctggacctatacgctcgacaataaccgggccgcgacgcaggcg
ctcaaccagggcgacgccgtcagcgacacgctgagcgtcagctcgctcgacggcacggcc
agccacaacatcgtcgtcgccatcaccggcgccaacgatgcggcttcgatcgtcgtcgat
gcgacggtcaccgacgatcgggcgacggtcgaggcgggtgcggccggcagcggcgatccg
aatgcctccggcaagctgacggtcagcgatgtcgacgacggcgaggcggcgtttgccgcc
ccggcctccctcaacggcatctatggcagcttcaccttcaatgccgccagcggcagctgg
acctatacgctcgacaataaccgggccgcgacgcaggcgctcaaccagggcgacgccgtc
agcgacacgctgagcgtcagctcgctcgacggcacggccagccacaacatcgtcgtcgcc
atcaccggcgccaacgatgcggcttcgatcgtcgtcgatgcgacggtcaccgacgatcgg
gcgacggtcgaggcgggtgcggccggcagcggcgatccgaatgcctccggcaagctgacg
gtcagcgatgtcgacgacggcgaggcggcgtttgccgccccggcctccctcaacggcatc
tatggcagcttcaccttcaatgccgccagcggcagctggacctatacgctcgacaataac
cgggccgcgacgcaggcgctcaaccagggcgacgccgtcagcgacacgctgagcgtcagc
tcgctcgacggcacggccagccacaacatcgtcgtcgccatcaccggcgcagatgatggt
ccagctaggcaggcgccgaccgacattaagctgacgcctgtcgttccggcggatagcgtt
aacttcaatagttttgagttcagtgggctgctgacggcgactgatcccgacgcaggtgga
ttcagcttcagcattgcctcgcagtcgaatccgggcttgttttcgattaccgacaatacg
cttcattcggatgcgctatcgacgaacggtacattttcagtgacggtaacggcaacgcag
accggtgatcctataggcccggccttcgaaaagaccgagacgttcacgattatcaccggt
ggcaatggcaactcggtggacaatccgaccggtggaacgggcgacgatatgctctacggc
ggtggcggtaacgatatgatgttcgggctcggaggtgacgacactcttttcggccaagac
ggcaacgacaccctaaacggtggtgctggcaacaacaccctgaccggaggcgtgggaaat
gataccttctttttccaaaagtttgccaccaccacgaaccatatgactgacttcaacgct
gggacgaatagcacaaccgtggacaggttccagttggacgtcggaggcggcacgttcgag
ttcgccgtcggcaacaacaatacaagcgtggacaatgtgaaggtgggaaacaacggcacg
atcaatgttgccggaacggaggttgccgtcaaaacggacgtgagcgtcacgaacgcaacc
gtccagagcaccatcaatggttacagcaacataaccacaggggcattgttcgtgttccac
aacacggatctcggccatgcggcggtctactacgatcagaacccaagttcagccggcggc
gcggtgctggttgctgaattcgacaacatcaccaccctcagcgggcttacaaatttcaac
tcgggcgacttcttgtttagctga
DBGET
integrated database retrieval system
