Rhizobium indigoferae: U5G49_002749
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Entry
U5G49_002749 CDS
T09660
Name
(GenBank) TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein
KO
K18220
ribosomal protection tetracycline resistance protein
Organism
rif
Rhizobium indigoferae
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
rif01504
]
U5G49_002749
Antimicrobial resistance genes [BR:
rif01504
]
Gene variants
Tetracycline resistance genes
Others
U5G49_002749
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Ortholog
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GFIT
Motif
Pfam:
GTP_EFTU
EFG_IV
EFG_C
EFG_III
MMR_HSR1
RF3_C
Motif
Other DBs
NCBI-ProteinID:
WQN37616
LinkDB
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Position
complement(2686766..2688712)
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AA seq
648 aa
AA seq
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MRTLNLGILAHVDAGKTSLTERLLFNAGVIDKLGSVDTGNTQTDTLELERQRGITIRAAV
VSFTIGDRIVNLIDTPGHPDFIAEVERVLGLLDAAVVVVSAVEGVQAQTRVLVRALRRLG
VPFIFFVNKVDRPGARYRDVMEALAAQLSVRPIAMSSVIDAGAKLARVEALAPGDEPLFS
ALGETLGENDEALLDDYVVAPDRLTEARLWRCLADQVARGLVHPVFAGAAMTGAGIPALA
SAIATILPERRPDPDGPVAGKIFKIERGWGGEKLSYIYLNSGTVRLRQSLGLPKGLERVT
AIHVFEAGRVHGAESLRAGQIARVSGLAGARIGDAVGGNPLGEWAHFAPPALETRVLAHR
PSDKAALWLALNQMAEQDPLINLRRNEEADEVYVSLYGEVQKEVIQSTLLTDFGLEARFE
ESTVILVERPLGTGSGLQILFKEPNPLLATVGLRVEPRAPGAGNSFALEVDVGQMPVAFY
RAVEETVFETLKQGIFGWQVIDCHVAMTAARHSSPASTAADFRQLTPWVLATALSAAQTV
LCEPVDRFHLVAPMENLSGVLTLLAKSAAATTDSVIADGVARLEGTMASQMVQSVQQQLP
GLTSGAGTMETSFDHYAPIAGPPRLRRRSGPDPFNGTEYLLRLRVVPI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcgcactttgaatctgggcatcctcgcccatgtggatgcaggcaagactagccttacc
gaaagactgctttttaacgccggggtgatcgacaagcttggcagcgtcgataccggcaat
acacagacggacactctcgaactcgagcggcaacgcggcatcacgatcagggccgcggtg
gtgtcgttcacgatcggcgacaggatcgtcaatctcatcgacacacctgggcatcccgat
ttcatcgccgaggtcgagagggtgctcggattgctggatgctgcggtcgtcgtcgtttcg
gcggtcgaaggcgtgcaggcgcagacgcgcgtgctggtccgggcgctgcggcggctcggc
gttcccttcatcttcttcgtcaacaaggtcgatcgtcccggcgcgcgctatcgggatgtg
atggaggctcttgccgcgcagctgtcggtccgccccatcgccatgtcctcggtgatcgac
gccggagccaagcttgcccgcgtggaggcgctcgctccgggagacgagccgctgttttcg
gcgctcggcgagacgctcggggaaaatgacgaggcgctgctcgatgactatgtcgtcgct
cccgatcggctgacggaggcaaggctctggcgctgcctggctgaccaggtagcgagaggc
ctcgtgcatcccgtcttcgcgggcgccgcgatgaccggcgccggcatccccgctttggca
tcggccattgcgacgatcctgcccgagcggcgccccgatccggatggtccggtggcgggc
aagatcttcaagatcgaacgcggctggggcggggaaaagctctcctacatctacctgaac
tccggcacggtgcggctccggcaatctctgggcctgcccaaaggcctggaacgggttacc
gcgatccatgtgttcgaggccggccgggttcatggcgccgagagcctccgcgccgggcag
atcgcgcgcgtcagcggccttgccggcgcccgcatcggtgatgctgtaggcggaaatcct
ttgggcgagtgggctcacttcgcgccgcccgcgctcgaaacccgcgttcttgcccatcgg
ccttccgacaaggcggcgctctggctggcgcttaaccagatggccgaacaggatcccttg
atcaatctgcgccggaacgaggaggcggacgaagtctacgtgtcgctttacggcgaggtg
cagaaggaggttatccaatcgaccctgctgacggatttcggcctcgaggcaaggttcgag
gagagcacggtcatcctggtcgagaggccattagggaccgggagcggcctgcagatcctc
ttcaaggagcccaatcctcttctcgcgaccgtcggcctgcgcgtcgagccgcgcgcccct
ggagcaggcaacagcttcgcgctcgaagtagatgtcggccagatgccggtcgccttttac
cgggcggtcgaggaaaccgtgtttgagacgttgaagcaggggattttcggctggcaggtc
atcgattgccacgtggcgatgacggcagcccgccacagctcgcccgcaagcaccgctgcc
gatttccggcagctgacgccgtgggtgctggcaacggcgttatcggccgcacagaccgtc
ctctgcgagccggtcgaccgctttcatctcgtcgcgcccatggagaacttgagcggcgtg
ctcaccctgcttgcaaaatcggcggcggcgacgacggattcggtgatcgccgatggcgtc
gcacggctcgagggcaccatggcgtctcagatggtccaaagcgtccagcagcaattgccg
ggcctgacgagcggggcggggaccatggaaacctctttcgatcactacgccccgatcgcc
ggcccgccgcgcctgcggcggcgttcggggccagatccgttcaacggcaccgaatatctg
ctgcgcctaagggttgttcccatttaa
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