Rhizobium indigoferae: U5G49_003019
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Entry
U5G49_003019 CDS
T09660
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
rif
Rhizobium indigoferae
Pathway
rif02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U5G49_003019
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rif02000
]
U5G49_003019
Transporters [BR:
rif02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
U5G49_003019
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
WQN37874
LinkDB
All DBs
Position
complement(2996302..2997216)
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AA seq
304 aa
AA seq
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MATIAAETEEDGQGARGGRGLRLSPSAISYLQATPLFVILGFFFLLPIAMIGVVSFWDYD
FAGLYPDFLTMNYTDTLGSWVTWKTYLNTLKFTAIVWSLTLVIGFWVAYFLAFHIRKTST
QMILFLVCTVPFMTSNIIRMISWIPVLGRNGLVNSTLINMGIIPKPIEWLLYSDFAVVLA
MVHLYTLFMVTPIFNTLMRIDRSLFEAARDAGASGWQVLWNVVIPLAKPGMAIGTIFVVT
LVMADFSTVQVMSGGQSASVALMMKNQMSLLQYPAAAANAVVLLAVVLLMVAAILRVVDI
RKEL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccatcgcggcggaaacggaggaggacggccagggcgcgcgcggcgggcgcgga
ctgaggctttccccatcggcgatatcctatctccaggcgacgccgctgttcgtcattctc
ggcttcttcttcctgctgccgatcgccatgatcggcgtcgtcagcttctgggactacgat
tttgccggtctctatcccgatttcctgacaatgaactacaccgacacgctcggttcgtgg
gtgacgtggaagacctatcttaacaccttgaaattcactgcgattgtctggtcgctgacg
ctcgtcatcggcttctgggtcgcctatttcttggccttccacattcgcaagacttcgacg
cagatgatcctcttcctcgtctgcaccgtgccgttcatgacgtcgaacatcatccgcatg
atctcgtggatcccggtgctcgggcgcaacggcctggtcaattcgacgctgatcaatatg
ggtatcatccccaagccgatcgaatggctgctctattccgatttcgctgtcgtgctcgcc
atggtgcatctctatacgctgttcatggtgacgccgatcttcaacacgctgatgcgcatc
gaccgatcgttgttcgaggcggcgcgcgatgccggcgcctccggctggcaggtgctgtgg
aatgtcgtcatcccgcttgccaagcccggcatggcgatcggcacgatcttcgtcgtcacg
cttgtcatggctgatttttcgacggtgcaggtgatgtccggcggccagagcgcctcggtg
gcactgatgatgaagaatcagatgtcgctcctgcaatatccggcggctgccgccaacgcc
gtggtgctgcttgccgtcgtgctcctgatggtcgcggccatcctgcgtgtcgtcgacatc
cgcaaggagctttga
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