Rhizobium indigoferae: U5G49_003107
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Entry
U5G49_003107 CDS
T09660
Name
(GenBank) marine proteobacterial sortase target protein
KO
K07114
Ca-activated chloride channel homolog
Organism
rif
Rhizobium indigoferae
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rif02000
]
U5G49_003107
Transporters [BR:
rif02000
]
Other transporters
Pores ion channels [TC:
1
]
U5G49_003107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
VWA_3
VWA
VWA_2
VIT_2
VWA_CoxE
DUF2201
VWA_4
vWA-TerF-like
Motif
Other DBs
NCBI-ProteinID:
WQN37959
LinkDB
All DBs
Position
3083335..3085722
Genome browser
AA seq
795 aa
AA seq
DB search
MFLEDEFAIGRIRARRISVSVLVAFTIFAACITAVLGLASAARAAETPQASAELAALVRP
NDVRSGSLLFPSKEPGFYVEAPRLKSDVAIDVSGPIARVKVTQRFQNPSQGWVEGTYVFP
LPDNSAVDTLKMQIGERFIEGQIKPRQEAREIYEQAKAEGKKTALLEQQRPNIFTNQVAN
IGPGETIVVQIEYQQMIHQSGGEFSLHFPMVVAPRYNPAPIVQTVEFNNGAGFATPRDPV
ENRDKIEAPVLDPRENARINPVSLTVDLKAGFPLGDVKSSFHAVDISQDGDQARTISLKA
DSVPADKDFELTWKAAPGKVPSAGLFREVIDGKTYLLAFVTPPIAPDTAAPPAKREVVFV
IDNSGSMSGPSIEQARQSLALAISKLNADDRFNVIRFDDTMTDYFKGLVTATPDNREKAI
AYVRGLTADGGTEMLPALQAALRNQGPVATGALRQVVFLTDGAIGNEQQLFQEITANRGD
ARVFTVGIGSAPNTYFMTKAAEVGRGTFTAIGSTDQVASRMGELFAKLQNPAMTDIAATF
EGIAAEDITPNPMPDLYSGEPVVLTARLPDDKPAGKLQIFGKTGEQPWRVEIDIANAANG
NGISKLWARRKIDDFEARAYERQDPAALDKDIETVALAHHLVSRVTSLVAVDVTPSRPVD
QPLGSTKLPLNLPEGWDFDKVLGENPAPRDDAERHGSATPTGSAGPEQAAAETQKLIASP
EIANMMAAAPTAKAATMIAQKSTTVNLPQTATRADEQIIRGLTMLLLALMAASGLAVWRR
RLKGIIAVGAKRNGL
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtttctggaagatgagtttgccatagggcgcattcgcgcgcgccgaatttccgtttca
gtccttgttgcattcactatctttgcggcctgcatcaccgcggtgctgggacttgcctcc
gccgcccgcgccgccgagacgccgcaggcatccgctgagctcgcagcacttgtccggccg
aacgacgtccgcagcggctcgctgctctttccgtcgaaggagccgggcttctatgtcgaa
gcgccgcggctgaagagtgatgtcgccatcgatgtctccggcccgatcgccagggtgaag
gtgacgcaacgcttccagaatccgagccagggttgggtcgagggcacctacgtctttccg
ctgccggacaattccgccgtcgacaccctgaaaatgcagatcggcgaacgcttcatcgaa
ggccagatcaagccgcgccaggaagcccgcgagatctacgagcaggccaaggccgagggc
aagaagacggcgttgctcgagcaacagcggccgaacatcttcaccaaccaggtcgccaat
atcggtcccggcgaaactatcgtcgtccagatcgagtatcagcagatgatccaccaatcg
ggcggcgagttctcgctgcacttcccgatggtcgtcgccccgcgctacaatccggcgccg
atcgtccagaccgtcgagttcaacaacggcgccggttttgccacaccgcgagacccggtg
gaaaaccgcgacaagatcgaagcccccgtgcttgacccgcgtgagaacgccaggatcaat
ccggtttcgctgaccgtcgatctcaaggccggtttcccgctcggcgacgtcaaatcctcc
ttccacgcggtcgatatcagccaggacggcgaccaggcgagaacgatcagcctgaaggcg
gactccgttcccgccgacaaggatttcgagctcacctggaaggccgcccccggcaaggtg
ccgagtgccggcctcttccgtgaagtgattgatggtaagacctatctgctcgccttcgtt
accccgcccattgcccccgatacggcagcgccgccggcgaaacgcgaggtggtcttcgtc
atcgacaattccggctccatgtccggcccgtcgatcgagcaggcaaggcagagcctggcg
cttgcgatctccaagctgaacgccgacgaccgcttcaacgtcatccgtttcgacgatacg
atgaccgattatttcaagggtctcgtcactgccacccctgacaatcgcgaaaaggcgatt
gcctatgtcagaggcctgactgccgacggcggcacggaaatgctacctgccttgcaggct
gcgctgcgtaaccagggaccggtcgcaaccggagcgctgcgccaggtcgtgttcctgacg
gatggcgcgatcggcaacgaacagcagcttttccaggagatcaccgcaaaccgcggcgat
gcccgtgtcttcaccgtcggcatcggctcggcgccgaacacctatttcatgaccaaggcc
gccgaagtcggccgcggcacctttacggcgatcggctcgaccgatcaggtggcgagccgc
atgggcgagcttttcgccaagctgcagaacccagccatgaccgatatcgccgcaaccttc
gaaggcatcgctgccgaggatatcacgccgaacccgatgccggacctctatagcggcgag
cctgtcgtgctgaccgcgcgactgcctgacgataagcccgccggcaagctgcagatcttc
ggcaagacaggcgagcagccctggcgcgtcgagatagatatcgccaatgccgccaacggc
aacggcatttccaagctctgggcgcggcgcaagatcgacgatttcgaggcgcgcgcctat
gaacgtcaggatccggccgcgctcgacaaggatatcgagaccgtcgcgctcgcccatcac
ctcgtctcccgcgtcaccagccttgttgccgtcgatgtcaccccgtctcgcccggtcgat
cagccgctcggctcgaccaagctgccgctcaacctgccggaaggttgggactttgataag
gtcctaggcgaaaaccctgcccctcgtgacgacgcagagcgccatggctcggctacgcct
acgggaagcgccggaccggagcaggctgcggccgaaacacagaaactcatcgcatcgcct
gagatcgcaaacatgatggctgcagccccgaccgccaaggccgccaccatgatcgcgcaa
aaaagcacgaccgtgaacctgccgcagacggcaacgcgcgccgacgagcagatcatccgc
gggctgaccatgttgctcctcgcgctgatggcggcaagcggcctggccgtctggcggcgg
cgcctcaagggcattatcgccgtcggagctaagcgaaatggtctctag
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