Rhizobium indigoferae: U5G49_003265
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Entry
U5G49_003265 CDS
T09660
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
rif
Rhizobium indigoferae
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rif03000
]
U5G49_003265
Transcription factors [BR:
rif03000
]
Prokaryotic type
Helix-turn-helix
LacI family
U5G49_003265
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
SpoIIID
HTH_31
HTH_Tnp_ISL3
HTH_IclR
MarR_2
HTH_23
HTH_3
Ku
Motif
Other DBs
NCBI-ProteinID:
WQN38116
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Position
3248895..3249923
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AA seq
342 aa
AA seq
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MNSKTDEVPGQTRVTIHGVAAAAGVSKSTVSRILDERLPRSDSETARRVRKVAEELGYVR
DVSAASLRRGNTMTIGVIVPRLTDTVMAMLYEALAKACSRSGRFAIVATTDDKPKADRLA
AESLLKRGVDGLILSTAREDDDFPDELAKRGIPYVLALRTDGHSLSSVGDDRLGGYLAAR
HLLDLGHRRIGVIAGPSYASSSRGRVEGFRHALEEAGLNADPSYIIPSTFGIESGAVAVE
TLMHLSPRPTAIFAVNDNTAIGALSGLTKLGLSVPQDISIVGYNDIPIVSHLPTPLTTLR
VPFEQIASNALDLLAGDNSAADERIRISAPTLIPRKSTAPIR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaaagacggatgaagttccggggcagactcgcgtcactattcacggcgtcgct
gccgcagccggtgtctccaagtctaccgtgtcccgcatactggacgagaggctaccccgc
tccgacagcgagaccgcgcggcgcgtgcgcaaggttgccgaagaactgggatacgtccgg
gatgtttccgcagcgagccttaggcgcggcaacacaatgacaatcggggtgatcgtgccc
aggttgacggatacggtcatggccatgctttacgaagccctggccaaggcttgcagccgt
agtggccgcttcgccattgtcgcaacgaccgacgacaagccaaaggcagaccggctcgcg
gccgagtctctgctgaagcgcggtgtcgatggactgattctttcgacagcgcgggaagac
gatgactttccggacgagctggcaaaacgcggtattccttatgtcctggcactccggacg
gatggccacagcctctcgtcggtcggcgatgaccggctcggtggttacctcgcggcacgc
cacctcctcgatctcggccatcgcagaattggcgtcattgccggtccatcctatgcctcc
agttcgcggggccgagtggagggtttccggcacgccctggaagaagctggattgaatgcg
gatccctcctacatcattccctcgactttcggcatcgagtccggtgcggtagccgtcgag
acactgatgcatcttagtccgcgcccaaccgctattttcgccgtcaacgacaacaccgcc
atcggcgccttgtcgggactgacgaaacttggcctttccgtgccgcaggacatctcgatc
gtaggctataacgatattccgattgtaagccacctccccacaccgctcacgacgttgcgg
gtgccgtttgagcaaattgcatcaaacgcccttgatcttctcgccggtgacaacagcgct
gccgacgagcgtattcggatctcggctccaaccctcattccaaggaaatcgacggcaccg
atacgctaa
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